Pairwise Alignments

Query, 314 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas fluorescens FW300-N2E2

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  447 bits (1151), Expect = e-130
 Identities = 229/310 (73%), Positives = 256/310 (82%)

Query: 1   MSQDFYFLLMPGFSAIGFISAIEPLRVANRFRGELYRWHVLSVDGGPVLASNGMSVNADA 60
           M +   FLL+PGFSA+GFISA+EPLRVANRF G+LYRW VLS+DG  VLASNGMS+NADA
Sbjct: 5   MMETIAFLLVPGFSAMGFISAVEPLRVANRFGGQLYRWQVLSLDGEAVLASNGMSINADA 64

Query: 61  ALEPLKKGATLWVVAGFEPLEFSTPTLERWLHRLDNEGVTLGGIDTGSVVLAEAGLLEGH 120
           AL   +    L VVAGFEPL    P L   L RL++E V LGGIDTG++VLAEAGLLEG+
Sbjct: 65  ALGEGEPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGY 124

Query: 121 RVTLHWEAIEAFKESYPQLSVTQELFEIDRRRITCAGGTASIDLMLDLIGQAHGSELAIQ 180
           R TLHWEA+EAFKE YP L  TQELFEIDR RITCAGGTASIDLML LI Q+HGSELA++
Sbjct: 125 RATLHWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVK 184

Query: 181 VSEQFVLGRIRPRKDHQRMEIANRYGIRNKKLVHVIGEMETHSEPPLSTLALAESIGVTR 240
           VSEQFVLGRIR R+DHQRM+I  RYGI NKKLVH IGEME H EPPLSTL LA +I VTR
Sbjct: 185 VSEQFVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVTR 244

Query: 241 RQLERLFRLHLNDTPSNFYLRLRLEKAQQLLRQTDMSVLEVSIACGFESPSYFTRSYRAR 300
           RQLERLFR+HL+ TPS FYL LRL+KA+QLL QTDMSV EVS+ACGFE PSYFTR Y+ R
Sbjct: 245 RQLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLR 304

Query: 301 FARCPREDRR 310
           F RCPRE+RR
Sbjct: 305 FGRCPREERR 314