Pairwise Alignments

Query, 392 a.a., ABC transporter for Carnitine, ATPase component (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 365 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  238 bits (608), Expect = 2e-67
 Identities = 131/285 (45%), Positives = 187/285 (65%), Gaps = 4/285 (1%)

Query: 4   IRFEDVDVIFSNRPKAALDLLDKGLSRPEILQQTGLIVGVEKASLSIEKGEICVLMGLSG 63
           I  +++  IF   P+  L+ +  G+ + E+  +   ++G+   ++++  G+I V+MGLSG
Sbjct: 5   IEIKNLYKIFGKHPEKYLEAVRSGMDKVELNDKHNHVLGLNNINITMPGGKITVVMGLSG 64

Query: 64  SGKSSLLRCINGLNTVSRGKLFVEHEGRQIDIASCSPAELKMMRTKRIAMVFQKFALMPW 123
           SGKS+L+R IN L   + G++  + E    DI   S + L+  R  + AMVFQKF L+P 
Sbjct: 65  SGKSTLIRHINRLIDPTAGEVLYDGE----DICGMSTSALRKFRRHKTAMVFQKFGLLPH 120

Query: 124 LTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLARALA 183
            TV EN  +GL++QG P KE        L  VGL  + +  P++LSGGMQQRVGLARALA
Sbjct: 121 RTVLENSVYGLDIQGVPRKESETKGRYWLNRVGLDGYEDYYPNQLSGGMQQRVGLARALA 180

Query: 184 MDADILLMDEPFSALDPLIRQGLQDELLELQRKLQKTIVFVSHDLDEALKLGTRIAIMKD 243
            DADILLMDE +SALDPLIR  +Q  LL+LQ++L+KT+VF++HDLDEAL+LG  IAI+KD
Sbjct: 181 NDADILLMDEAYSALDPLIRVDMQTMLLDLQQELKKTVVFITHDLDEALRLGDHIAILKD 240

Query: 244 GKIIQYSKPEEIVLNPADDYVRTFVAHTNPLNVLCGRSLMRTLDN 288
           G+++Q    + I+L+PAD YV  FV   N   VL   ++M  LD+
Sbjct: 241 GEVVQQGDGQSIILSPADGYVTDFVRDVNRSRVLQATTVMEPLDS 285