Pairwise Alignments

Query, 622 a.a., ATP-dependent RNA helicase RhlE from Pseudomonas fluorescens FW300-N2E2

Subject, 557 a.a., RNA helicase from Pseudomonas simiae WCS417

 Score =  292 bits (747), Expect = 3e-83
 Identities = 155/373 (41%), Positives = 231/373 (61%), Gaps = 11/373 (2%)

Query: 3   FASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
           FA+  L+  ++ A+ A GY +P+ +QQ++IP ++ G+D++  AQTGTGKT  FALPIL  
Sbjct: 8   FAAFNLNPNILAAVAATGYEEPSAIQQQSIPIIMAGKDMIGQAQTGTGKTAAFALPILHC 67

Query: 63  LFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKVYARDLKFVSA-CIFGGVGMNP 121
           + P            R+P+ L+L PTRELA QV  +F+ YA+ +  V+   ++GG  M P
Sbjct: 68  IDP----------AKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGP 117

Query: 122 QVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARL 181
           Q++A+  G  ++VA PGRL D   +    LS V  LVLDEAD ML +GF+ D++ +   L
Sbjct: 118 QLKAIRNGAQIVVATPGRLCDHLRRDEKVLSTVNHLVLDEADEMLKLGFMDDLEVIFKAL 177

Query: 182 PAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALLA 241
           P  RQ +LFSAT  + I  +A + L +PE +++     TV  IEQ    + A  K + + 
Sbjct: 178 PPTRQTVLFSATLPQSIRAIAERHLRDPEHVKIQTKTQTVTAIEQAHLLVHADQKTSAVL 237

Query: 242 HLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKAGEVR 301
            L+    ++ +++F RTK     LA  L+  G  A A++G+ +QN R + +   K G + 
Sbjct: 238 SLLEVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLD 297

Query: 302 ILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLL 361
           I+VATD+AARGLD+ ++ HV N ++P   E YVHRIGRTGRAGR G A+ LV P E ++L
Sbjct: 298 IVVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRML 357

Query: 362 KSIERMTKQKIAD 374
           + IER+T QK+A+
Sbjct: 358 QVIERVTGQKVAE 370