Pairwise Alignments

Query, 622 a.a., ATP-dependent RNA helicase RhlE from Pseudomonas fluorescens FW300-N2E2

Subject, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

 Score =  343 bits (881), Expect = 8e-99
 Identities = 207/484 (42%), Positives = 279/484 (57%), Gaps = 19/484 (3%)

Query: 2   SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
           SF++L L+E L  A+   GY   TP+Q++AIP VL G+D+M AAQTGTGKT  F+LP+L+
Sbjct: 4   SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63

Query: 62  RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKVYARDLKFVSACIFGGVGMNP 121
           R+  + +   S    P   R LVL PTRELA QV +  K+YA+     S  +FGG+ M P
Sbjct: 64  RMLKHENASTSPARHP--VRALVLLPTRELADQVAQQIKLYAKYTNLRSTVVFGGIDMKP 121

Query: 122 QVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARL 181
           Q   + +GV+VLVA PGRLLD     +  L+ VE +VLDEADRMLD+GF+ D++++L+ L
Sbjct: 122 QTLELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181

Query: 182 PAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALLA 241
           P +R  LLFSATFS +I  LA   L NP  IEV  PN T   +EQ  + +    KR  L 
Sbjct: 182 PKQRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVSDDDKRRALK 241

Query: 242 HLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKAGEVR 301
            ++      Q  VF  +K G  RLA  L++ GL   A+HG+KSQ+ R KALA FKAGEV 
Sbjct: 242 QIVRQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVD 301

Query: 302 ILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVA-PDEEKL 360
           +LV TD+AARGLDI  +P V NF++P   EDYVHRIGRTGRAG SG A+S  +  ++ +L
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARL 361

Query: 361 LKSIERMTKQKIADGDLMGFDASTIEAEKPEVRERPDVRNPRNARGPRGDGPNGSGGGGG 420
           +  IE++ K+KI        +   +E E+    +RP  R     R  R +G  G      
Sbjct: 362 VADIEKLIKKKI--------ELEPVEFEE----DRPRGRINDGRRHWREEGEAGDARDVL 409

Query: 421 RKDKGKDKGKEKSASNSNGRGER-PAREQKP---REGTPAREQQRPAPRAAADRAPDEFL 476
            + + +       A    GR  R PA  + P   +   P      PA  AAA   P   +
Sbjct: 410 DQPRERSSSLSGDARRGGGRPHRAPAAPRDPFFDKPYEPGEPDTTPAWEAAAKATPARGI 469

Query: 477 DDDI 480
             +I
Sbjct: 470 SSNI 473