Pairwise Alignments

Query, 622 a.a., ATP-dependent RNA helicase RhlE from Pseudomonas fluorescens FW300-N2E2

Subject, 463 a.a., ATP-dependent RNA helicase Atu1833 from Sphingobium sp. HT1-2

 Score =  319 bits (817), Expect = 2e-91
 Identities = 191/485 (39%), Positives = 272/485 (56%), Gaps = 27/485 (5%)

Query: 1   MSFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
           M+FA LGLS+ L+ A+  AGY  PTP+Q +AIP VL  +D++  AQTGTGKT  F LP++
Sbjct: 1   MTFADLGLSDELLKAVTEAGYDTPTPIQAQAIPPVLMMKDIIGIAQTGTGKTASFVLPMI 60

Query: 61  ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKVYARDLKFVSACIFGGVGMN 120
           + L          R     PR L+L PTRELAAQV E+F+ Y +  K   A + GGV M 
Sbjct: 61  DILAHG-------RARALMPRSLILEPTRELAAQVAENFEKYGKYHKLSMALLIGGVQMG 113

Query: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
            Q++A+ +GVDVL+A PGRL+DL  +G + L+   +LV+DEADRMLDMGF+ D++++  +
Sbjct: 114 DQIKALEKGVDVLIATPGRLMDLFQRGKILLNGCNMLVIDEADRMLDMGFIPDIEEICTK 173

Query: 181 LPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALL 240
           LPA+RQ LLFSAT    I  LA + L NP+ IEV  P T    I QR+ ++ +  KR  L
Sbjct: 174 LPAQRQTLLFSATMPPVIKKLADRFLDNPKSIEVARPATASTNITQRLVKVDSRKKREAL 233

Query: 241 AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKAGEV 300
             ++ A   +  ++F   K     L + L +HG  +  IHG+  Q +R   L  F+ G V
Sbjct: 234 RAMLEAEDVQSAVIFCNRKTTVRELNKSLQRHGFKSGEIHGDIDQASRIAELERFRDGSV 293

Query: 301 RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360
            ILVA+D+AARGLDI  + HV NF+ P   +DYVHRIGRTGRAG  G A + VA ++ + 
Sbjct: 294 NILVASDVAARGLDIKGVSHVFNFDAPWHPDDYVHRIGRTGRAGAKGVAYTFVAAEDAEA 353

Query: 361 LKSIERMTKQKIADGDLMGFDASTIEAEKPEVRERPDVRNPRNARGPRGDGPNGSGGGGG 420
           + +I+++   KI   D +  +     A  P  +E P        +  R +  N   GG  
Sbjct: 354 IDNIQKLIGTKI---DYV--ETPVAAAPAPRAKEEP-------RKADREERDNERSGGRE 401

Query: 421 RKDKGKDKGKEKSASNSNGRGERPAREQKPREGTPAREQQRPAPRAAADRAPDEFLDDDI 480
            + K + K   +S    + R +R  R+       P   +Q P      D  PD+  +  +
Sbjct: 402 ARRKPERKDDRRSDKRDDRRDDR--RDAPAARSAPHSRRQEP------DDGPDDGWNGPV 453

Query: 481 DNFGN 485
             F N
Sbjct: 454 PEFLN 458