Pairwise Alignments

Query, 1977 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 754 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  335 bits (860), Expect = 1e-95
 Identities = 245/785 (31%), Positives = 399/785 (50%), Gaps = 73/785 (9%)

Query: 1211 DPELLEIFLEEGFDILDSSGAALLRWQEEPSNRQAVETLLRDLHTLKGGARMVEIVPIGD 1270
            D  LLE+F  E    +    A LL  + +P+    +E+ +R  H+LKG AR+V +     
Sbjct: 8    DASLLELFSLEAEAQVQVLSAGLLALERDPTQADYLESCMRAAHSLKGAARIVGVDAGVS 67

Query: 1271 LAHELENLYEGLSA-----------GLLQPTPALFTLLQSSHDRLAQMLDAVRAGHPCPL 1319
            +AH +E+                   LLQ T  L  +    +   A  +DA  A      
Sbjct: 68   VAHVMEDCLVSAQEQRLVLGAEHIDALLQGTDLLMRIATPGNSVGAPDIDAYVA------ 121

Query: 1320 ADRLIAQIQAVNHSQENAA--PQAVSAPEP--VPTPIVSPPAA--PARPDPGAAGDGADM 1373
               L+ ++   N  Q  A   P   +A EP  +  P V PP A  PA         G  +
Sbjct: 122  ---LMGRLLDPNAPQAPAVVLPSVETAVEPLRIELPDVEPPPATEPAPQRKRVTEGGERV 178

Query: 1374 VKVSAELLDDLVNLAGETSIFRGRIEQQVNDARVALGEMETTIERMRDQLRRLDTETQGR 1433
            ++V+AE L+ L++L+ ++ +   R++  +            T++R++             
Sbjct: 179  LRVTAERLNSLLDLSSKSLVETQRLKPWL-----------ATMQRLK------------- 214

Query: 1434 ILSRQQVEAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLLELKETLDRSNHDAEVLL 1493
               RQQ    R   EE + + +  H+   Q   AL ++   L E ++ L +   + +   
Sbjct: 215  ---RQQSTGLR-ALEELN-VHLKDHALSLQAQEALGDARRLLAETQQLLAQKTAELDEFA 269

Query: 1494 QQQGRINTELQEGLMRTRMVPFERMLPRLKRIVRQVAQELGKDVEFLVGNADGEMDRNVL 1553
             Q  +    L +  +  RM PF  +L    R+VR + + L K V   +     ++DR+VL
Sbjct: 270  WQASQRAQVLYDTALACRMRPFADVLSGQARMVRDLGRSLDKQVRLEIEGEKTQVDRDVL 329

Query: 1554 ERMAAPLEHMLRNAVDHGLEPADVRIAAGKPARGRISLDLSREGGDIIFDIRDDGAGVPL 1613
            E++ APL H+LRNAVDHG+EP + RI AGKPA G I L  S + G ++ ++ DDGAGV L
Sbjct: 330  EKLEAPLTHLLRNAVDHGIEPPEQRILAGKPAEGVIRLRASHQAGLLVLELADDGAGVDL 389

Query: 1614 EAVRSKAIKRGLLAPD---SDISDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVR 1670
            E VR   ++RG L+P+   + +S+ ++L F+  PGFS  +K+T++SGRGVG+D V   VR
Sbjct: 390  ERVRRSIVERG-LSPEQTAASLSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVR 448

Query: 1671 QLGGSMVIDSTPGQGVHFRIRLPFTVAVNRALMVHCHEDQYAIPLNTIESIVRVLP---A 1727
            QL G++V++ T G+G  F + +P T++V R+L+V   ++ YA PL  IE +  + P    
Sbjct: 449  QLRGAVVLEQTAGEGSRFHLEVPLTLSVVRSLVVEVGDEAYAFPLAHIERMCDLAPEDIV 508

Query: 1728 ELDGHYQLDPPTYTYAGQRYELCYLGELLKTGARPKLLGQSQPLPVLLVQCNERHVAVQV 1787
            +++G        + + G+   L    +LL    RP   G +Q L V++++  E    V V
Sbjct: 509  QVEGRQH-----FWHEGRHIGLVAASQLLN---RPATQGSNQTLKVVVIRERETIYGVAV 560

Query: 1788 DATAGTREIVVKSLGPQFSAVQGLSGATILGDGRVVLILDLLAPIRALPHQVPR-RQVPV 1846
            +   G R +VV  L  +   VQ +S   +L DG VVLI+D+   +R++   +   R   +
Sbjct: 561  ERFIGERTLVVLPLDERLGKVQDISAGALLDDGSVVLIVDVEDLLRSVDKLLDTGRLERI 620

Query: 1847 EGEGEPQRP-LLVLVVDDSVTVRKVTSRLLERHGMHVLTAKDGVDAMALLAEHAPDLMLL 1905
              + + Q P   +LVVDDS+TVR++  +LL   G  V  A DG+D    L     DL++ 
Sbjct: 621  ARQNQAQAPRKRILVVDDSLTVRELQRKLLLNRGYDVAVAVDGMDGWNALRSEDFDLLIT 680

Query: 1906 DIEMPRMDGFEVATQVRNDPRLAHLPIIMITSRTGQKHRDRAMAIGVNDYLGK-PYQESV 1964
            DI+MPRMDG E+ + +R D RL  LP+++++ +  ++ R R +  G + YL K  + +  
Sbjct: 681  DIDMPRMDGIELVSLLRRDNRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDA 740

Query: 1965 LLDSI 1969
            LLD++
Sbjct: 741  LLDAV 745



 Score = 38.5 bits (88), Expect = 3e-06
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 3/97 (3%)

Query: 766 DPLLLKIFDNEAQGHLASLNRFLDQSADHLPLQAS--DELQRALHTLKGSASMAGVLPIA 823
           D  LL++F  EA+  +  L+  L  + +  P QA   +   RA H+LKG+A + GV    
Sbjct: 8   DASLLELFSLEAEAQVQVLSAGL-LALERDPTQADYLESCMRAAHSLKGAARIVGVDAGV 66

Query: 824 ELAGAMDELAREYRVHLIALDLDEVELLLEAEGLLRR 860
            +A  M++     +   + L  + ++ LL+   LL R
Sbjct: 67  SVAHVMEDCLVSAQEQRLVLGAEHIDALLQGTDLLMR 103



 Score = 34.7 bits (78), Expect = 5e-05
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 13/141 (9%)

Query: 1066 DTSMEDDLVAIFLEEAQ---DILESAAQALQRWLADPDNGAPLSSLQRDLHTLKGGARMA 1122
            D   +  L+ +F  EA+    +L +   AL+R   DP     L S  R  H+LKG AR+ 
Sbjct: 4    DQMRDASLLELFSLEAEAQVQVLSAGLLALER---DPTQADYLESCMRAAHSLKGAARIV 60

Query: 1123 DIRPVSDLAQELENLYEGLVDRRYSYSEELAQLLASSHERLDLLLGQLQQGQPLGDPVAL 1182
             +     +A  +E+      ++R     E    L    +  DLL+     G  +G P   
Sbjct: 61   GVDAGVSVAHVMEDCLVSAQEQRLVLGAEHIDALL---QGTDLLMRIATPGNSVGAPD-- 115

Query: 1183 IDAIRRL--RQDKPNAIETSA 1201
            IDA   L  R   PNA +  A
Sbjct: 116  IDAYVALMGRLLDPNAPQAPA 136



 Score = 32.7 bits (73), Expect = 2e-04
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%)

Query: 19 ETLKQAHLALNRLVDDPQASDALGQCLACIHQVHGGLQMVEFYGAALLAEEMEQLCAALQ 78
          + L    LAL R   DP  +D L  C+   H + G  ++V       +A  ME    + Q
Sbjct: 24 QVLSAGLLALER---DPTQADYLESCMRAAHSLKGAARIVGVDAGVSVAHVMEDCLVSAQ 80

Query: 79 DNRVTHRDEAISLLSQ 94
          + R+    E I  L Q
Sbjct: 81 EQRLVLGAEHIDALLQ 96