Pairwise Alignments
Query, 1977 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2
Subject, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45
Score = 578 bits (1490), Expect = e-168
Identities = 585/2121 (27%), Positives = 921/2121 (43%), Gaps = 248/2121 (11%)
Query: 6 DYVALEWVKGEIAETLKQAHLALNRLVDDPQA-----SDALGQCLACIHQVHGGLQMVEF 60
D L WV GEI ++L +L R V D S +L +HQ G LQMV
Sbjct: 20 DLGPLAWVLGEIQKSLDGVGKSLRRFVRDVGTAAEPDSGSLQTARQQLHQAVGALQMVGH 79
Query: 61 YGAALLAEEMEQLCAALQDNRVTHRDEAISLLSQALGQLPIYLDRVQGARRDLPLVVLPL 120
AL+ +E + + A+ + +A + +L+ + + + + P
Sbjct: 80 ASPALVLGAIEFAVQGFIADPQRCTEAAVHKIERAGFAVTDFLNALLAGKPVSSVALFPQ 139
Query: 121 INDLRSARGESLLSETSLFSP--ELPDIAPLSDEALQRLEPADLPNTLRKLRQTLQMALV 178
D+ G + L+ +I P +A +PA +R L ++
Sbjct: 140 YRDVLELVGNERVHPADLWGTAWRWVEIKPALTQAAVAYDPA--------VRSRLDREVL 191
Query: 179 GLLREQDDATHLGYLAKVFHRLETLCAGAPLNAL-------WQVASALVEGMRDGRIANS 231
L++ D + RL LC G AL W +A+ E + G I
Sbjct: 192 QLVKTGD--------TQAARRLHGLCLGLGRGALLPRVASFWTLAAGFFEALSLGLI--- 240
Query: 232 PALRSLFKEADKELKRL--LDQGMPGINQPAPPHLLKSLLFYIAKA------EHPSGQMQ 283
PA + + A + L + L +G ++ L + LLF+ A+A E P+ ++
Sbjct: 241 PADAYVKRAASRVLLQYATLARGDSLVSD----RLGQDLLFFCAQAVPTARDEAPT--LR 294
Query: 284 IMKERYSLDDALPDSAMVDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQ 343
++ + + + P E+ R D + VL+ + + KE D
Sbjct: 295 TVRNAWGIANE-PHVDYTVEQFGRF-----DPL--VLSQARKRIETAKEMWSALSGGD-- 344
Query: 344 HASELDSLLAPLRQIADTLAVLG-----FGQPRKVIIDQL--AVVLSLAQGQREPDDATL 396
++ RQ+ADT A LG P ++ L AV SL GQ PD
Sbjct: 345 --------VSRTRQVADTFANLGESLQKLHPPSLPMVQALTHAVEASLRSGQ-PPDTELA 395
Query: 397 MDVAGALLYVEATL-----------------AGMVGTVEPESR--------EDTHLPTTD 431
M+VA ++LY+EA L AG + V+ ED + +D
Sbjct: 396 MEVATSVLYLEAALEDLDPSDPQLTARTLQLAGRIERVQGGGHSEPLEPWMEDLYRRVSD 455
Query: 432 LTQIHQIVIKEAHTCLQQAKDMIVDYIDADWNSEQLQPLPALLTQVRGALAMIPLSRAAS 491
Q V+ E + L + + + Y L+ +P L Q+RG +++ L +AA
Sbjct: 456 -RQTMGTVVDELRSHLSELEKSLDQYFRRPAEKGLLRTVPTQLMQMRGVFSVLGLDQAAH 514
Query: 492 LVEACNAFIRDHLLLDQAQPGWEELDHLADVITGLEYYLERLSEDPETS----------G 541
V+ + L+ D L + + L + ++ L P + G
Sbjct: 515 TVQRMRDDVEAMLVSTSPAEEMAGFDALGNNLGALGFLIDMLGYQPALAKRLFVFDAEAG 574
Query: 542 E--PLLNG-VERSLAALGYFPDEARVPVLDDVLSPNE--AQVMQDLQELDDPQTVQSLAE 596
E PL+ S AA G +A P + VLS E AQ+ L L P ++
Sbjct: 575 ELKPLMGRQATDSSAADGAAAGQA--PAAEAVLSIEEVDAQIASKLAALATPNRKAKVSP 632
Query: 597 VLASPISAVNPPARSTPGSLLPPPSDERPVDDELREVFLEETGEVLDVLREYLPRWSAHP 656
+ A + + S LP +D+L+ +FL+E EV+ E + +++P
Sbjct: 633 IEEFSNKADSWTNKIAGPSALPDTEVTELEEDDLQNIFLDEAREVVQNGLEAIAELASYP 692
Query: 657 DDHGALSELRRAFHTLKGSGRMVRALVLGELAWAVENLLNRVLERSVEPQASVRQLVEDT 716
DD L+ LRRAFHTLKGS RMV G+ AW++E +LN L + E T
Sbjct: 693 DDTEELTILRRAFHTLKGSSRMVGLTEFGDAAWSLEQVLNTWLADQRAATPELLSGTERT 752
Query: 717 VQLLPALVAEFAAN--HQRQRDDVDRLAARAHVLAKGGDEEDEDEQDVAALDPLLLKIFD 774
++ V AA H Q R+A + L G + V D L +
Sbjct: 753 LREFSEWVEAIAAGQPHSWQAASFSRVA---NALLAG----EPVPPPVRVADAEALAV-- 803
Query: 775 NEAQGHLASLNRFLDQSADHLPLQASDELQRALHTLKGSASMAGVLPIAELAGA-MDELA 833
A H+A+ + LP+ A +L T + ++ V P+A +A + E A
Sbjct: 804 --AARHIAAETPVAAPAVAPLPMPALPDLPDLSLTPE---PVSHVEPVAHVAPEPVPEPA 858
Query: 834 RE-YRVHLIALDLDEVELLLEAEGLLRRGLRQLHSEPLAAIPGAEDLILRAQALLAERLH 892
E H A + + + + + PL ++P ++ A A R
Sbjct: 859 LEPLDWHAPAQSPEVDDDFASTDFIDFESKQNTEPAPLLSLPSGDEFDFLAPAKTQARAE 918
Query: 893 AANNAPDKVLRTKRDPQLINNFLAQGMDILLDAESLLQR-WQQHPG-EGQELSALLDELT 950
P+ V+ +P++ +A A SL W+ P E + A E
Sbjct: 919 -----PEPVVPPAAEPEVPAEPVASVETESPAATSLPDFVWEPEPEPEPVPVPAQAQEPE 973
Query: 951 TLGEGAHLADLHPVDELCEALLDLYGAVEESSLAVSNEFFQEAQRAHEALIDMLDELAAG 1010
+ A P +E + L L E++ A + + A A EA A
Sbjct: 974 VIE-----AARPPHEEEPKPELQLAAEPEQAPEAAAEPEPEPAPAAIEA--------APE 1020
Query: 1011 QHVHPQPARVQALRRLLQESLDP-SATGLIRSDGSRTLSIRELSHATAEMERDAPVDTSM 1069
P P + L +++ P A L+ + + + + + V +S
Sbjct: 1021 PEPEPAPVIAEVLAPIVEAPAAPVEAQILVADEVPEPVEAHAPAQPPHQAVEEIAVSSSA 1080
Query: 1070 EDD------------LVAIFLEEAQDILESAAQALQRWLADPDNGAPLSSLQRDLHTLKG 1117
ED L ++L EA + A + W + P S++ H+L G
Sbjct: 1081 EDQVKVIGPLRIGIALYNVYLNEADEWSRQLATDVGEWALESHERLPDSTVAL-AHSLAG 1139
Query: 1118 GARMADIRPVSDLAQELENLYEGLVDRRYSYSEELAQLLASSHERLDLLLGQLQQG---- 1173
+ +S +A+ E+ + L + S S E +L ++ + L LL Q G
Sbjct: 1140 SSATVGFHSLSGMARLFESALQHL-QMQGSGSREQGMVLVAAADELRRLLHQFAVGFLRD 1198
Query: 1174 --------------QPLGDPVALIDAIRRLRQDKPN------AIETSAAAQADGAGHDPE 1213
P+ +A+ R L+Q + A++ S A D +
Sbjct: 1199 PAEGTLQALRDIANSPMPTEIAMRAEARPLQQVVSSDSIADVALDDSEDAIDLADAVDVD 1258
Query: 1214 LLEIFLEEGFDILDSSGAALLRWQEEPSNRQAVETLLRDLHTLKGGARMVEIVPIGDLAH 1273
L IF EE ++L G +L +W P + +LR LHTLKG AR+ + +G+ AH
Sbjct: 1259 LFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGERAH 1318
Query: 1274 ELENLYEGLSA------------GLLQPTPALFTLLQSSHD----RLAQMLDAVRAGHPC 1317
+E+ E L + G L A F L+++ D LAQ++ + A P
Sbjct: 1319 RMESEIELLGSQGAERADIEKLLGRLDALQATFDALRAADDATQVELAQLVASASASAPA 1378
Query: 1318 PLADRLIAQIQAVNHSQENAAPQA----------VSAPEPVPTPIVSPPAAPARPDPGAA 1367
+ +A V + E+AAP A ++A P + P APA P A
Sbjct: 1379 AQLVQ-VAPEAGVPANDESAAPVAGDEDGETADDIAAAAPATASALQPRPAPALLAPLRA 1437
Query: 1368 GDGADMVKVSAELLDDLVNLAGETSIFRGRIEQQVNDARVALGEMETTIERMRDQLRRLD 1427
+ V++ +LLD LV GE I R R+E ++ R +L ++ ++R+R QLR ++
Sbjct: 1438 VS-SQAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRGSLADLTGNLDRLRQQLRDIE 1496
Query: 1428 TETQGRILSRQQVEAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLLELKETLDRSNH 1487
+ + ++ SR + + + FDPLE DR +++Q+L+R + ES +D+ ++ TL ++
Sbjct: 1497 VQAESQMQSR--LAQAKDSQQSFDPLEFDRFTRVQELTRMMAESVNDVATVQRTLQKTVQ 1554
Query: 1488 DAEVLLQQQGRINTELQEGLMRTRMVPFERMLPRLKRIVRQVAQELGKDVEFLVGNADGE 1547
E L Q R ELQ GL+RTRMV FE + RL R+VRQ +++ GK V + E
Sbjct: 1555 ATEDDLSVQARQTRELQRGLLRTRMVEFEGISDRLYRVVRQASKDTGKQVRLDIVGGSIE 1614
Query: 1548 MDRNVLERMAAPLEHMLRNAVDHGLEPADVRIAAGKPARGRISLDLSREGGDIIFDIRDD 1607
MDR VL+RM EH+LRN V HG+E A R AGK A G I +DL EG D+ RDD
Sbjct: 1615 MDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGNDVSVSFRDD 1674
Query: 1608 GAGVPLEAVRSKAIKRGLLAPDSDISDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHE 1667
GAG+ + + +A GL+ D ++S + + I +PGFSTA ++++++GRG+GMDVV
Sbjct: 1675 GAGLDRKRIAERARVLGLIGADQELSAEEATELIFKPGFSTAGQVSELAGRGIGMDVVRA 1734
Query: 1668 EVRQLGGSMVIDSTPGQGVHFRIRLPFTVAVNRALMVHCHEDQYAIPLNTIESIVRVLPA 1727
++ LGG + STPGQG F++ LP T AV +M+ E +P N +E + RV
Sbjct: 1735 QIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVPSNLVELVQRVSGT 1794
Query: 1728 ELDGHYQLDPPTYTYAGQRYELCYLGELLKTGARPKLLGQSQPLPVLLVQCNERHVAVQV 1787
+LD Y + ++ + ++ + G LL+ R + ++ +++V+ + VA+ V
Sbjct: 1795 DLDAAYLHN--SHPFGSEQVPFYWAGALLQASTRSE-HAAAKNNTLVVVRSAAQRVALHV 1851
Query: 1788 DATAGTREIVVKSLGPQFSAVQGLSGATILGDGRVVLILDLLAPIRALPHQ--------- 1838
D G +E+VVK+LGPQ + + GL+G ++L G V LI + +A Q
Sbjct: 1852 DEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALIYNPVALAAVHGEQARERQAAAL 1911
Query: 1839 --VPRRQVPVEGE-GEPQRPL----------LVLVVDDSVTVRKVTSRLLERHGMHVLTA 1885
P R E E G PQ P+ LVLVVDDS+TVR+VT RLL+R G V A
Sbjct: 1912 AAAPARAAAAEAEQGVPQEPVVLAPVTPQIPLVLVVDDSITVRRVTQRLLQREGYRVSLA 1971
Query: 1886 KDGVDAMALLAEHAPDLMLLDIEMPRMDGFEVATQVRNDPRLAHLPIIMITSRTGQKHRD 1945
DG+ A+ L + P ++L DIEMPRMDGF++A +R D LA LPIIMITSR +KHRD
Sbjct: 1972 ADGLQALERLQQERPAVVLSDIEMPRMDGFDLARNIRADSALAELPIIMITSRIAEKHRD 2031
Query: 1946 RAMAIGVNDYLGKPYQESVLL 1966
A +GVN YLGKPY E LL
Sbjct: 2032 YARTLGVNHYLGKPYSEEELL 2052