Pairwise Alignments

Query, 260 a.a., Alkanesulfonates transport system permease protein from Pseudomonas fluorescens FW300-N2E2

Subject, 263 a.a., putative transport system permease protein (VIMSS) from Escherichia coli BW25113

 Score =  390 bits (1002), Expect = e-113
 Identities = 189/254 (74%), Positives = 224/254 (88%)

Query: 1   MKKIIHNLAPWAVPLLLLAVWQLSVSTGWLSTRILPAPVAVIEAGANLVRSGEIWTHLAI 60
           +KK +  +APW +P+ ++AVWQL+ S GWLSTRILP+P  V+ A   L  SGE+W HLAI
Sbjct: 5   VKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAI 64

Query: 61  SGWRAAVGFLIGGGIGLALGFITGLSKWGERLLDSSVQMLRNIPHLALIPLVILWFGIDE 120
           S WRA +GF IGG +GL LG I+GLS+WGERLLD+S+QMLRN+PHLALIPLVILWFGIDE
Sbjct: 65  SSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDE 124

Query: 121 SAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGLRLFRQVILPGALPSILVG 180
           SAKIFLVALGTLFPIY+NT+HGIRN+D  LVEM+RSYGLSG+ LF  VILPGALPSI+VG
Sbjct: 125 SAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVG 184

Query: 181 VRFALGFMWLTLIVAETISASAGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARG 240
           VRFALG MWLTLIVAETISA++GIGYLAMNAREFLQTDVVV+AI+LYA+LGKLAD++A+ 
Sbjct: 185 VRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQL 244

Query: 241 LERVWLRWHPAYQV 254
           LER+WLRW+PAY +
Sbjct: 245 LERLWLRWNPAYHL 258