Pairwise Alignments

Query, 321 a.a., Alkanesulfonates-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 324 a.a., ABC transporter, substrate-binding protein, aliphatic sulfonate from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  263 bits (673), Expect = 3e-75
 Identities = 145/312 (46%), Positives = 201/312 (64%), Gaps = 5/312 (1%)

Query: 7   RRGLVALFAAAVSLGVITQAQA-ETLRIGYQKYGTLV-LLKAKGSLEKRLAAQGVDVQWT 64
           RR L+A   A ++L +   A+A ETLRIGYQK  TL+ LLK +G+LEK LAAQ V V W 
Sbjct: 13  RRALLAGLLAGLALCITLPAEAQETLRIGYQKSSTLITLLKTQGTLEKALAAQHVAVTWH 72

Query: 65  EFPGGPQLLEGLNVGSIDFGV-TGETPPVFAQAAGADLLYVAYEPPAPTSEAILVPKGSA 123
           EFP G  LLE LNVG++D      +T  +FAQAA A L Y A E  +P+++AI+V K S 
Sbjct: 73  EFPSGLPLLEALNVGNVDISADVADTVQIFAQAAQARLTYFAQEAASPSAQAIIVHKNSP 132

Query: 124 IQSVQELKGKKVALNKGSNVHYLLVRALEDAGLEYSDIQTVFLPPADARAAFERGSVDAW 183
           ++ + +LKGKKVA+ K +  HYLL+ AL+ AGL +SDIQ  +L PAD RAAFE   VDAW
Sbjct: 133 VRQLWDLKGKKVAVTKAAGSHYLLIAALKKAGLAFSDIQPAYLSPADGRAAFENNKVDAW 192

Query: 184 VIWDPYQAAAEQQLQARTLRDGKGIVDNHQFYLATKPYAQKNPQVITTLVEEVRAVGEWS 243
           V W+P+  +A++QL  RTL DGKG+    ++YL    YA+++PQV++ + E++   G W 
Sbjct: 193 VTWEPFLTSAQRQLPTRTLADGKGLASYKRYYLTGTGYAKEHPQVLSVVYEQLHKAGIWL 252

Query: 244 KANPDDVTKQVSPLLG-LPADITLTSVKRQGYGALFLTPEVVAAQQKIADSFYQLKLIPK 302
           KANP D  K +SPL G L  +    +   + Y    +T + +  QQ IAD+F+   L+PK
Sbjct: 253 KANPRDAAKVLSPLWGNLDIETVEIANSNRAYQIQPVTHDQLDEQQHIADAFFAAGLLPK 312

Query: 303 PLSIKDV-IWTP 313
            +  +DV +W P
Sbjct: 313 AVDAQDVEVWKP 324