Pairwise Alignments

Query, 529 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  451 bits (1159), Expect = e-131
 Identities = 233/534 (43%), Positives = 333/534 (62%), Gaps = 13/534 (2%)

Query: 1   MRLAALPLLLAPLLIT--PQALAAA-LSVCTEASPEGFDVVQYNSLTTTNASADVLMNRL 57
           ++ A +P LL   L++  P A+AA+ L  C+E SP GFD  QY + T  +ASA+ + NRL
Sbjct: 2   LKHAVIPFLLGAGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRL 61

Query: 58  VDFDTAGGKVVPSLAERWEVSTDGLTYVFKLRPQVKFHHTDYFTPRRDLTAEDVKFSFER 117
             F+  G  V+P LA +WEVS DG TY F LR  VKFH TDYF P R   A+DV F+F R
Sbjct: 62  TQFERGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNR 121

Query: 118 MLDPANPWHKVAQSGFPHAQSMQLPALIKKVDALDPLTVRFTLDHADSTFLATLSMGFAS 177
           MLD  NP+ K   + FP+   M +   I KV+ LD  TV+FTL+  D+ F+  L+M FAS
Sbjct: 122 MLDKDNPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFAS 181

Query: 178 IYSAEYADQLMKAGTPEKLNSLPIGTGPFIFSRFQKDASIRYKANDAYFGGKP-QVDPLV 236
           I SAEYADQL+K G    +N  PIGTGPF+FS++QKDA IR+K N  Y+  +  ++D L+
Sbjct: 182 IQSAEYADQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLI 241

Query: 237 FAITPDANVRLQKLRRNECQIALSPKPLDVQAAKQEPTLKVEQTDAFMTAFVAIN----- 291
           FAIT DA+VR+QKL++NECQ+ L P+P D++  K +  L++ Q   F   ++A N     
Sbjct: 242 FAITTDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKI 301

Query: 292 ---SQHPPLDKPEVRQAINLAFDKASYLKTVFEGTAEAANGPYPPNTWSYAKSLPGYTHD 348
              ++  P+ + +VRQA+++A DK   +++V++G  + A    PP  WSY  S+     D
Sbjct: 302 KGSNEANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFD 361

Query: 349 LAKARDLLAKAGLKEGFQTTIWTRPSGSLLNPNPSVGAQLLQSDLAQIGIQAEIRVIEWG 408
             KA+ LL +AG+KEG + T+W  P     NPN  + A++LQSD A+IGI+A+I   EWG
Sbjct: 362 PEKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWG 421

Query: 409 ELIRRAKAGEHDLLFMGWAGDNGDPDNFLTPQFSCAAVKSGTNFARYCNPDLDKLISAGK 468
           E I+R+K GE   + +GW+GDNGDPDN+L   + C AV  G NF+++C    D LI   K
Sbjct: 422 EYIKRSKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAV-DGNNFSKWCYKPYDDLIKQAK 480

Query: 469 TTGEQGVRAKLYEQAQAQIQQQALWLPLAHPTAFALTRKDVQGYSVSPFGRQDY 522
            T +Q  R +LY++AQ  +++Q    P+AH T +      V+ + +SPF    +
Sbjct: 481 ATSDQAKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSF 534