Pairwise Alignments

Query, 643 a.a., VgrG-3 protein from Pseudomonas fluorescens FW300-N2E2

Subject, 754 a.a., vgrG protein from Agrobacterium fabrum C58

 Score =  313 bits (802), Expect = 2e-89
 Identities = 190/553 (34%), Positives = 305/553 (55%), Gaps = 34/553 (6%)

Query: 3   FNQASRLAKVTSPLGPEVLLLKDMGGGEELGRLFNYELQLHSLDNAIDLNQLLGKPMCVS 62
           F QASR+ KV+SPLG + LL + +   E + +LF+  L + +   A+   +L+G+ + VS
Sbjct: 10  FIQASRVLKVSSPLGEDQLLPERLSVEEGVSQLFDIRLTVRAKKEAVKPEELIGRLVDVS 69

Query: 63  LQL-----DGGG-ERYFHGIVARCSQN--VDQGQFASYQATLRPWLWLLTRTSDCRIFQN 114
           +++     DGGG  R F+G+V    +   + +G   SY  T+RP +WLL+R SDCRI+ +
Sbjct: 70  IEISQGDGDGGGVRRPFNGLVTELHEGPPITRGM-RSYALTIRPQMWLLSRRSDCRIWMD 128

Query: 115 LTIPQIIKQVFRDLGFS--DFEDALSRPYREWEYCVQYRETSFDFVSRLMEQEGIYYFFR 172
            T  +I++ +F + G    D    +S P  +  Y VQ+ ET  D+++R  E++G++Y+F 
Sbjct: 129 KTAVEIVETLFSEHGIPAPDTSGIISPPPAQ-HYSVQFNETDLDYLTRRFEEDGLFYWFS 187

Query: 173 HEQGRHVLVLADA----YGAHTTAPGYGSVPYYPKNEQQRERDHIHDWHLAQEVQPGSLE 228
           HE G H L +AD+     G    A G G+V      +   +R+HI+DW        G   
Sbjct: 188 HEDGSHKLHVADSASGWLGPSPAAQGEGTVRLA---QGSSDRNHINDWARRFSYVSGQRA 244

Query: 229 LNDYDFQRPSARIDVRS-AMPRPHTAGDYPLYDYPGTYVQSTDGEHYARTRIEALQSLHE 287
             D++F+ P       + ++ +   A    LY+YP       + E   + R +++++ H+
Sbjct: 245 GADWNFETPGMVPGTMTPSLVQMPDATKRELYEYPARIKTVEEAERAQKLRTQSIEADHD 304

Query: 288 QVELAGNARGLGSGHLFSLTGFSRQDQN-REYLIVGARYYISQESGETGGGAPTAQFESS 346
           +V  +   R L +G  F+    +  +    E++IV A + I   S ET    P  ++ + 
Sbjct: 305 RVFGSSTTRILEAGRRFTPFEVAHPEHAYEEHVIVRASHSIVDLSYETNSNEP--EYRNH 362

Query: 347 LTCIDAQQSYRPLATTHRPIVKGPQTALVVGPKGEEIWTDQFGRVKVHFYWDRHDQSNEN 406
              I A+    P  +T RP ++G Q A+V GP+GEEI  DQ+GR+K+ F WDR  + +  
Sbjct: 363 FEAIPARVPLTPHRSTKRPRIEGTQVAIVAGPEGEEIHPDQYGRIKLWFPWDRKAKKDGT 422

Query: 407 SSCWIRVSQSWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYDLPEN 466
            +CW+RVSQ+W G  WG+  IPRIG EV+V+F++GDPD+P++ G V N   +VPYDLP N
Sbjct: 423 DTCWVRVSQAWGGGTWGAQVIPRIGMEVMVAFVDGDPDKPLVIGVVNNPANSVPYDLPAN 482

Query: 467 ATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLYIHAERNQDIVVEVDESHSVGHDRNKS 526
            T+  ++S S KG     FNEI  ED+ G E  + HA++        D++  V +DR K 
Sbjct: 483 KTRMVLRSNSHKGD---GFNEITFEDEAGKENQFFHAQK--------DQTTRVLNDRTKR 531

Query: 527 IGHNETVTIGNNR 539
           I  +E  ++G NR
Sbjct: 532 IDRHEVASVGGNR 544



 Score = 36.6 bits (83), Expect = 4e-06
 Identities = 18/67 (26%), Positives = 35/67 (52%)

Query: 534 TIGNNRLRIVKQEDILSVGQRKTDSISQSYVIEVGENLRLVCGESILELNASGQINLSGV 593
           ++G  R   +    + +VGQ   +S+ +   I VGE   + CG+S   + A+G++ + G 
Sbjct: 675 SVGVARAEQIGVSKVTNVGQTSLESVGKFKKIAVGEEFVIECGDSKFIMKANGEVIILGK 734

Query: 594 QISFYAS 600
             +F A+
Sbjct: 735 TFNFVAT 741