Pairwise Alignments

Query, 265 a.a., Amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N2E2

Subject, 222 a.a., L-cystine ABC transporter (wide substrate range), permease protein YecS from Pseudomonas sp. S08-1

 Score =  152 bits (383), Expect = 8e-42
 Identities = 87/220 (39%), Positives = 122/220 (55%), Gaps = 10/220 (4%)

Query: 35  DLKFSIILDKLPNLLGVHLAPNGFLQGAVLTLFLCLCSIVASSLLGFITALARLSSSAVA 94
           +    + LD LP LL          +G + T+ L L  +    LLGF  AL RL      
Sbjct: 3   ETSLQLALDSLPFLL----------KGTLWTVVLSLGGMFFGLLLGFALALLRLYGYWPL 52

Query: 95  FGIASFYASFFRGTPLLIQILLIYLGLPQLGVVPGAIAAGIIALSLNYGAYLSEIFRAGI 154
             ++  Y SFFRGTPLL+Q+ +IY GLPQLG+    + A +I  SLN GAY SEI RA I
Sbjct: 53  QWLSRIYVSFFRGTPLLVQLFMIYYGLPQLGIQLEPLTAALIGFSLNMGAYTSEILRAAI 112

Query: 155 LGVPHGQREASLALGLSETVIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEV 214
             +  GQ EA+ ++G+      +R  LPQA RT +PP  N FIS++KD++L + + V E+
Sbjct: 113 ASIDRGQWEAAASIGMGRAQTLYRAILPQAARTALPPLGNSFISLVKDTALAATIQVPEL 172

Query: 215 MFLAQSYGRSSYRYIEMLTTAAIIYWLMSIALELIQARME 254
              AQ     ++    M   AA+IYW+++  L   QAR+E
Sbjct: 173 FRQAQLITARTFEIFTMYLAAALIYWVLASILAHFQARLE 212