Pairwise Alignments

Query, 265 a.a., Amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N2E2

Subject, 221 a.a., L-cystine transport system permease protein YecS from Pseudomonas sp. RS175

 Score =  149 bits (377), Expect = 4e-41
 Identities = 84/202 (41%), Positives = 118/202 (58%), Gaps = 4/202 (1%)

Query: 59  LQGAVLTLFLCLCSIVASSLLGFITALARLSSSAVAFGIASFYASFFRGTPLLIQILLIY 118
           L+GA  T+ L L  +    LLGF  AL RLS   +   IA  Y SFFRGTPLL+Q+ +IY
Sbjct: 16  LKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVNWIARIYVSFFRGTPLLVQLFVIY 75

Query: 119 LGLPQLGVVPGAIAAGIIALSLNYGAYLSEIFRAGILGVPHGQREASLALGLSETVIFWR 178
            GLPQLG+    + A +I  SLN  AY  EI RA I  +  GQ EA+ ++G++      R
Sbjct: 76  YGLPQLGIELDPLPAALIGFSLNMAAYACEILRAAISSIERGQWEAAASIGMTRAQTLRR 135

Query: 179 VTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAII 238
             LPQA RT +PP  N FIS++KD++L + + V E+   AQ     ++    M   AA+I
Sbjct: 136 AILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALI 195

Query: 239 YWLMSIAL----ELIQARMERH 256
           YW+++  L     +++AR+ RH
Sbjct: 196 YWVLASVLSHLQNVLEARVNRH 217