Pairwise Alignments

Query, 346 a.a., HflC protein from Pseudomonas fluorescens FW300-N2E2

Subject, 289 a.a., integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex from Pseudomonas putida KT2440

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 77/258 (29%), Positives = 115/258 (44%), Gaps = 10/258 (3%)

Query: 49  ALLVAFAVAAASLVQVRSGEATVITRFGNPARVLLQPGLGWRWPAPFEAAIPVDLRLRTT 108
           A +V   VA  S   V   E  V+ RFG   +  +QPGL  + P   +     D RL T 
Sbjct: 11  AAVVLAIVAWNSFYIVSQTERAVLLRFGKVVQADVQPGLHVKIPYVNQVR-RFDARLMTL 69

Query: 109 SSGLQDVGTRDGLRIIVQAYVAWQVQGDPENVQRFMRAVQNQPDEAARQIRTFVGSALET 168
            +  Q   T +   ++V AY  W+V+    + +RF  A       A  ++   + S L  
Sbjct: 70  DAPTQRFLTLEKKAVMVDAYAKWRVK----DAERFYTATSGMKQIADERLSRRLESGLRD 125

Query: 169 TAASFDLANLVNTDASQVRIADFEAQLRQQIDQQLLTTYGVRVLQVGVERLTLPSVTLTA 228
                 L  +V+ +   + +AD  A L +   ++L    G+ V+ V V+ + LP     +
Sbjct: 126 QFGKRTLHEVVSGERDAL-MADITASLNRMASKEL----GIEVVDVRVKAIDLPKEVNRS 180

Query: 229 TVDRMRAERETIATERTAIGKREAAQIRSAAERDARVLQADATVKAADIEAQSRVEAAEI 288
             DRM  ERE  A E  A G   A  IR+ A+R  RVL A+A  +A +       +AA I
Sbjct: 181 VFDRMSTEREREAREHRAKGNELAEGIRADADRQRRVLLAEAYREAEETRGDGDAQAAAI 240

Query: 289 YGRAYAGSPQLYNLLRSL 306
           Y +AY+     Y   RSL
Sbjct: 241 YAKAYSQDADFYAFHRSL 258