Pairwise Alignments

Query, 312 a.a., ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C from Pseudomonas fluorescens FW300-N2E2

Subject, 312 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  485 bits (1249), Expect = e-142
 Identities = 245/312 (78%), Positives = 282/312 (90%)

Query: 1   METRAHHVLIGLFTVIVVAGALLFGLWLAKSSVDSEFKDYEVVFNEAVSGLSRGSSVEYS 60
           METRAHHV+IGLF+VIVV GA+LFGLWLAKSSVDS F+DYEV+FNEAVSGLS+GS+V+YS
Sbjct: 1   METRAHHVMIGLFSVIVVVGAMLFGLWLAKSSVDSAFQDYEVIFNEAVSGLSQGSAVQYS 60

Query: 61  GIKVGDVVNLRLDPNDPRRVLARVRLSGETPIKQDTQAKLALTGITGTSIIQLSGGTPQS 120
           GIKVGDV +LRLDP DPRRVLAR+RL+G+TPIK+DTQAKLALTGITGTSIIQLSGGTPQS
Sbjct: 61  GIKVGDVTSLRLDPKDPRRVLARIRLAGQTPIKEDTQAKLALTGITGTSIIQLSGGTPQS 120

Query: 121 PALTGHDGEPPVIIAAPSPIARLLNNSDDLMTSINLLLHNANEVFSSDNVQSLGKTLEHL 180
             L G +GE P IIA+PSPIARLLNNS+DLMTSINLLLHNAN +FS +NV+ L  TL++L
Sbjct: 121 AELKGKNGELPQIIASPSPIARLLNNSNDLMTSINLLLHNANHMFSRENVERLSNTLDNL 180

Query: 181 EQTTGVIAEQRGDIRQAMQQLASIGKQASATLEQTTALMRNANGLLNDQGKQAFGSAGQA 240
           +QTTG IA+QRGDI+  MQQL  + KQASA LEQTT LMRNANGLLN+QGKQAFGSA QA
Sbjct: 181 QQTTGAIADQRGDIKVVMQQLMQVSKQASAALEQTTVLMRNANGLLNEQGKQAFGSAEQA 240

Query: 241 MQSLARSTATLDKLLNDNRDSLNNGMQGLNALAPAVRELRETLSALRGISRRLDANPSGY 300
           M+SL +STATL+ LL +N+DS+N+GMQGLN LAPAVRELRETL +LR ISRRL+ANPSGY
Sbjct: 241 MKSLEQSTATLNTLLTNNKDSVNSGMQGLNELAPAVRELRETLGSLRAISRRLEANPSGY 300

Query: 301 LLGNDKDKEFTP 312
           LLG+DK+KEFTP
Sbjct: 301 LLGSDKNKEFTP 312