Pairwise Alignments

Query, 255 a.a., Integral membrane protein TerC from Pseudomonas fluorescens FW300-N2E2

Subject, 526 a.a., Putative capsular polysaccharide transport protein YegH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  238 bits (607), Expect = 2e-67
 Identities = 116/241 (48%), Positives = 168/241 (69%), Gaps = 4/241 (1%)

Query: 1   MEWLTNPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQARTRIFGLALAMVTRIL 60
           MEW+ +P IW    TL  +E+VLGIDN++ I+IL  ++P   + R RI GL LAM+ R+L
Sbjct: 1   MEWIADPSIWAGLVTLIVIELVLGIDNLVFIAILAEKLPPGQRDRARITGLILAMIMRLL 60

Query: 61  LLLSITWVMRLTADLFEVFGQGISGRDLILFFGGLFLLWKSSQEMYHALEGEDETNEAPS 120
           LL SI+W++ LT  LF V     S RDLI+ FGG FLL+K++ E+   LEG+D  N    
Sbjct: 61  LLASISWLVTLTKPLFSVQALSFSARDLIMLFGGFFLLFKATMELNERLEGKDSANPTQR 120

Query: 121 GKGGNFIYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVAAIIVAVLVMMLASATISEFI 180
            KG  F   + QI ++D +FSLDSVITAVGMV H+ VM+AA+I+A+ +M+LAS +++ F+
Sbjct: 121 -KGAKFWAVVAQIVVLDAIFSLDSVITAVGMVDHLAVMMAAVIIAISLMLLASKSLTRFV 179

Query: 181 DKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAINIKMRTAIARKR 240
           + HP++ +L LSFLL++G  L+AE F  H+PKGY+Y A+ FS+ +EA+N   + AI  +R
Sbjct: 180 NNHPTIVILCLSFLLMIGFSLVAEGFGFHIPKGYLYAAIGFSVMIEALN---QLAIFNRR 236

Query: 241 K 241
           +
Sbjct: 237 R 237