Pairwise Alignments

Query, 197 a.a., Probable transmembrane protein from Pseudomonas fluorescens FW300-N2E2

Subject, 204 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score = 57.0 bits (136), Expect = 2e-13
 Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 23/196 (11%)

Query: 19  RRKGRVQLLLIVLGVIGPMILATGMYKFQFWVPDSRSYHGELIGTGQTRAEIGVQADEQR 78
           +RKGR    L+ +    P+++   M+KF  W P  +S HG+LI    + A       +++
Sbjct: 15  QRKGRRVFFLLAVFFTVPLLVVVAMFKFD-WRPSGKS-HGQLIHPPVSIAHATHWVSDRQ 72

Query: 79  ------WQI---LVTAPQECSVDCRQLVYLARQVQIGLGREASRASHALAVAQPLDAEYD 129
                 WQ    +V   +EC   C Q +Y  RQ+ + L ++  R    L + Q  D    
Sbjct: 73  QALPTFWQDKWNMVFIARECDSACMQRLYDLRQIYVSLYKDMIRVQRVL-ITQQADT--- 128

Query: 130 AQLQREYPQLQRYPLDLPAY-QKGAQGSGGAQ-------LWIIDPHSNLVLRYDARVKGK 181
             ++  YP L     +     + G   SGG Q       ++ IDP  N++++Y   ++ K
Sbjct: 129 TAIRARYPDLLIINGETQQIAELGGLLSGGGQNTLEAHRVYFIDPLGNIMMQYGPEMEAK 188

Query: 182 DLLNDLRHLLKLSNIG 197
            +  DL  LLK S  G
Sbjct: 189 WIRKDLVKLLKASWAG 204