Pairwise Alignments

Query, 363 a.a., Cytochrome c oxidase polypeptide II (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 319 a.a., Cytochrome c oxidase subunit 2 from Azospirillum sp. SherDot2

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 61/325 (18%)

Query: 30  LHMTIFWICVVIGIIVFGAMFWSMMMHRR-STGQNAAHFHENTRVEILWTIVPFVILVLM 88
           L   +  +   I ++VFG M    + +R+ S  +         RVE+ WT + F   +++
Sbjct: 21  LFAALLGVSAFILLLVFGLMILFCVRYRKGSKVERGNRLGRTWRVEVAWTGLTFAAFLVL 80

Query: 89  AIPATATLIKMYDSSESDIDIQVTGYQWKWHYKYLGQDVEFFSNLATPAEQIHNQSAKGE 148
                   ++++       DI V G QW W  ++ G                      G+
Sbjct: 81  YFWGANLYVRIHSPPSDATDIYVVGKQWMWKIEHPG----------------------GQ 118

Query: 149 HYLLEVDKPLVLPVDAKVRFLVTSADVIHSWWVPAFAVKRDAIPGFVNEAWTRVDKPGLY 208
               E+D  L +PV   VR ++TS DVIH + +PAF +++DA+PG     W    + G Y
Sbjct: 119 R---EID-TLHVPVGRPVRLVLTSQDVIHDFAIPAFRIRQDAVPGRYETLWFTPTEVGEY 174

Query: 209 RGQCAELCGKDHGFMPIVVEVKSKPDYEKWLGERKAEAAQLKELTSKEWTREELVERGDK 268
           R  CAE CG  H  M   V V    D++ WL  +    +              L + G+ 
Sbjct: 175 RLFCAEFCGTWHARMGGTVVVMEPSDFQHWLDSQDPGPS--------------LAQEGEA 220

Query: 269 VYHT-TCVACHQAEGQGLPPMFPALKGSKIATGPIKDHLNIVFHGK--------PGTSMA 319
           ++ +  C  CH   G    P    L G  +   P++    ++   +        P   +A
Sbjct: 221 LFRSYGCSGCHGGAGTVHAPKLEGLFGRPV---PLEGGRTVIADDRYLRDSILMPKAEIA 277

Query: 320 A--------FGKQLSEVDIAAVVTY 336
           A        F  Q+ E D+  +V Y
Sbjct: 278 AGYPPVMPSFAGQIGEDDLLKLVAY 302