Pairwise Alignments

Query, 662 a.a., Membrane bound c-di-GMP receptor LapD from Pseudomonas fluorescens FW300-N2E2

Subject, 645 a.a., Cyclic di-GMP phosphodiesterase Gmr from Alteromonas macleodii MIT1002

 Score =  271 bits (693), Expect = 7e-77
 Identities = 181/653 (27%), Positives = 329/653 (50%), Gaps = 16/653 (2%)

Query: 1   MSLFKQLLIAICLFLVVAFSGSFMVSLESSRAQYVN-QLRSHAQDAATALALSLTPNIDD 59
           M L  QL  ++ +FLV+ F+GSF+++++ +R +YVN QL +HAQD AT+L LS+TP I +
Sbjct: 1   MRLSTQLSTSLAIFLVLVFAGSFIINVKLTR-EYVNEQLATHAQDTATSLGLSITPYIGE 59

Query: 60  P---AMVELMVSSIFDSGYYASIRVVDVATDRTLVERTGTPDAGSVPQWFVKLIGLEPAG 116
           P    + E MV++IFD G+Y  I V D+  +  L+ER       SVP WF  L+ + P  
Sbjct: 60  PNGIIVAETMVNAIFDRGFYQYITVSDMEGN-LLIERKNPNTQDSVPAWFTNLVEVTPPV 118

Query: 117 GDAIVSRGWEQAARVEVVSHPMFALAKLWQSALGSLGWLLLCGAVSAVLGALLLRRQLKP 176
               ++ GW  A  + V SHP  A   L++S   S         V+ +    ++    KP
Sbjct: 119 QRTELNDGWTLAGELTVQSHPGLANETLYESVKQSAFMFFAAFVVAYIALLFIITAITKP 178

Query: 177 LDYMVHQSHAIARREFLSLPELPRTPELRRVVQAMNQMVEKLKALFQEQAERSEKLRVES 236
           L  +VH+ + I  ++F  +   P T EL  + QA+N++   ++ +F+E ++++E  + ++
Sbjct: 179 LRIVVHKINDIQNQKFSQINYKPFTQELTFITQAVNKLSSSVEGMFKELSQKAEHFKAQA 238

Query: 237 YQDNLTGLANRRYFEMQLNARVSNPEQASSGYLLLLRVKDLAGLNQRLGGQRTDQLLQAV 296
           Y+D+LTG+ NR  F   +NA +S+   +  GY++++R+  L  +N  LG Q  D  + +V
Sbjct: 239 YEDSLTGVQNRSAFTRHMNALLSSTAHSDEGYIVIIRLAHLNAINTSLGAQEGDNYVTSV 298

Query: 297 GEQLLRECARYPETHNLVTRIRGGEFAVLAPGLVREEALQLAQNLEAALASLHATGATDV 356
              L +      ET +L  R+ G +FA++   + + E     ++L   L  +H     D 
Sbjct: 299 ANILKQFSKESAETTHLF-RLSGADFALVTEAISKRECSNKIEDLSETL--VHCNPLKDG 355

Query: 357 ASVASIGLAPFVHGDSPQAVLQLGDQALAQAESQGEPGWACLDHSAVASVGDDHHAWHTL 416
                +G+A F    S   +++  D AL  A  Q   GW     ++  S    + AW   
Sbjct: 356 IRSVWMGVAQFSDKQSFSEIMENADSALMAATKQAN-GW---QFASELSHLHSNTAWRER 411

Query: 417 LDQALNHQRFELYFQPVVAARDTQVVLHYKVLSRLLD-EQGQTIPAGRFLPWLERFGWTA 475
           L+  L  Q  ++  QPV++  +     +++  +R  D E G  IP  + +P  ER     
Sbjct: 412 LNVILEQQYADMLIQPVMSIAE-NTPSYFEAFARFKDKESGSVIPMSQLIPASERLNLIP 470

Query: 476 RLDRLMLEQVLRQMAGHEQSLALNLSSATLADPQALNKIFEILRAHSNLGSRLTLEIGEE 535
            +D+L+   V ++++  +  +A+N+++A+LA+      +   L  ++ L ++L  E  + 
Sbjct: 471 EVDKLVATLVFKKLSQAKCDVAINIANASLANSHFRTWLVAQLNQNTALCTKLVFEFEDS 530

Query: 536 QL-PEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLSRLGLAYLKIDGSYIRAIDQES 594
            L   +       + L  LG  ++++ FG   + +  L  +   ++KI G   + I  + 
Sbjct: 531 ALIHHKDDTISFCKTLMTLGCRVTIEHFGENLASLAGLRAIQPHFVKISGKLTKDIHTDK 590

Query: 595 DKRLFIEAIQRAAHSIDLPLIAERVETEGELAVIREMGLFGVQGQLVGEPRRW 647
           D +LF+ ++   A  +++ +IAE VE E E   + ++ +   QG    +P  W
Sbjct: 591 DNQLFVSSLLSIARGLNINVIAELVENEAESVALTQLDVAYQQGFYFAKPTLW 643