Pairwise Alignments

Query, 449 a.a., Type I secretion system, outer membrane component LapE from Pseudomonas fluorescens FW300-N2E2

Subject, 489 a.a., Type I secretion outer membrane protein, TolC precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 87.4 bits (215), Expect = 9e-22
 Identities = 101/425 (23%), Positives = 177/425 (41%), Gaps = 41/425 (9%)

Query: 19  QAQTLPQAMQQALDVHPEIQAGVNSRLAADYQLKAAKGGYLPRVDLAAGYGREGTDSVTT 78
           QA+ L Q  QQA   +PE++     R AA  ++  A+   LP++ L A Y         T
Sbjct: 21  QAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADY---------T 71

Query: 79  RSGGTNHWETLNRSESS--LRLSQMVFDGFATSSEVGRQQATVNARAYSLLDASERTG-- 134
            S G      +N +E+S  L+L+Q +FD    S   G    T+  +A  + D + +T   
Sbjct: 72  YSNGYRDANGINSNETSASLQLTQTLFD---MSKWRG---LTLQEKAAGIQDVTYQTDQQ 125

Query: 135 ---LTVAQVYLDVLTRREFVRLAEENLKSHERIFDQIKLRTSRGVGSGADLDQAEARMAQ 191
              L  A  Y  VL   + +   +   ++  R  DQ   R + G+ +  D+  A A+   
Sbjct: 126 TLILNTANAYFKVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDT 185

Query: 192 ARNNLITEQTNLADAETNYLSAVGQLPDQLER------PADFLALLPANLTEARAQMLEN 245
              N +T + NL +A        G    +L          D    + A L EA  + L  
Sbjct: 186 VLANEVTARNNLDNAVEELRQVTGNYYPELASLNVEHFKTDKPKAVNALLKEAENRNLS- 244

Query: 246 SPVLRSAEADIAAAEQQYEAAKSSFYPRFDAELGR-TADNDLDGQNGHNNEW------QA 298
              L  A      A +Q   A+    P  +       +D    G   ++ ++      Q 
Sbjct: 245 ---LLQARLSQDLAREQIRQAQDGHLPTLNLTASTGISDTSYSGSKTNSTQYDDSNMGQN 301

Query: 299 MLRMRFNL--YAGGSNKADLESKSYLSNQALDIRNNALRQLNEELGLAWNALNNANAQVP 356
            + + F+L  Y GG   + ++   Y    A +   +A R + + +  ++N +N + + + 
Sbjct: 302 KIGLNFSLPLYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSIN 361

Query: 357 VAQQYVDRSANVRTAYQKQFSLGERTLLDLLDSENELFSASRRLAEIKNVQLFTQYRIKA 416
             +Q V  + +   A +  +S+G RT++D+LD+   L+ A ++LA  +   L  Q  IK 
Sbjct: 362 AYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYDAKQQLANARYTYLINQLNIKY 421

Query: 417 TMGQL 421
            +G L
Sbjct: 422 ALGTL 426