Pairwise Alignments

Query, 449 a.a., Type I secretion system, outer membrane component LapE from Pseudomonas fluorescens FW300-N2E2

Subject, 493 a.a., outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) from Escherichia coli BW25113

 Score = 88.6 bits (218), Expect = 4e-22
 Identities = 99/429 (23%), Positives = 180/429 (41%), Gaps = 38/429 (8%)

Query: 15  ASFVQAQTLPQAMQQALDVHPEIQAGVNSRLAADYQLKAAKGGYLPRVDLAAGYGREGTD 74
           +S  QA+ L Q  QQA   +PE++     R AA  ++  A+   LP++ L A Y      
Sbjct: 17  SSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADY------ 70

Query: 75  SVTTRSGGTNHWETLNRS--ESSLRLSQMVFDGFATSSEVGRQQA-TVNARAYSLLDASE 131
              T S G      +N +   +SL+L+Q +FD       + + +A T+  +A  + D + 
Sbjct: 71  ---TYSNGYRDANGINSNATSASLQLTQSIFD-------MSKWRALTLQEKAAGIQDVTY 120

Query: 132 RTG-----LTVAQVYLDVLTRREFVRLAEENLKSHERIFDQIKLRTSRGVGSGADLDQAE 186
           +T      L  A  Y +VL   + +   +   ++  R  DQ   R + G+ +  D+  A 
Sbjct: 121 QTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR 180

Query: 187 ARMAQARNNLITEQTNLADAETNYLSAVGQLPDQLE--RPADFLALLPANLTEARAQMLE 244
           A+      N +T + NL +A        G    +L      +F    P  +     +  +
Sbjct: 181 AQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEK 240

Query: 245 NSPVLRSAEADIAAAEQQYEAAKSSFYPRFDAELGR-TADNDLDG---------QNGHNN 294
            +  L  A      A +Q   A+    P  D       +D    G         Q   +N
Sbjct: 241 RNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSN 300

Query: 295 EWQAMLRMRFNL--YAGGSNKADLESKSYLSNQALDIRNNALRQLNEELGLAWNALNNAN 352
             Q  + + F+L  Y GG   + ++   Y    A +   +A R + + +  ++N +N + 
Sbjct: 301 MGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASI 360

Query: 353 AQVPVAQQYVDRSANVRTAYQKQFSLGERTLLDLLDSENELFSASRRLAEIKNVQLFTQY 412
           + +   +Q V  + +   A +  +S+G RT++D+LD+   L++A + LA  +   L  Q 
Sbjct: 361 SSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQL 420

Query: 413 RIKATMGQL 421
            IK+ +G L
Sbjct: 421 NIKSALGTL 429