Pairwise Alignments

Query, 721 a.a., Type I secretion system ATPase, LssB family LapB from Pseudomonas fluorescens FW300-N2E2

Subject, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

 Score =  330 bits (845), Expect = 2e-94
 Identities = 216/680 (31%), Positives = 355/680 (52%), Gaps = 13/680 (1%)

Query: 29  LLALCMLHQKPASAAMLTTGLPLPKQRLSVELLSRAAARAGLQGR---VLQRKLEQIPTI 85
           L+ L   H    SA  L        +R S   L RA  + GL+ +   V   +L+Q P  
Sbjct: 36  LITLARYHGVAVSAEQLQHDHAAAGERFSTGPLLRAFQQLGLKAKHRSVDPARLQQTP-- 93

Query: 86  AMPALLLLKDGRSAVLLGWVGDDQARLLLSESDGGEVTISRELLADDYSGKVFFAQPQHK 145
            +PA+ +   G   ++    G+ Q  +    S   +     ELL   +SG++   +   +
Sbjct: 94  -LPAIAVDTRGEYFIIARVEGE-QVLVQDPHSRAPQALTLAELLVR-WSGELILVRSDAQ 150

Query: 146 FDVNHGTLIPRARSWFRDTLKRSRWLYADAIAASLLINIIAMAAPLFVMNVYDRVVPNQA 205
             +    L     +WF   L + R L+ + +  SL+I I+A+  PLF   V D+V+ ++ 
Sbjct: 151 LPLG---LSRFDFTWFIPALVKYRRLFGEVLVVSLVIQILALLTPLFFQVVMDKVLVHRG 207

Query: 206 ESTLWVLAVGIIGAYVFDLILKMLRSLCLDLAGKKTDLIISATLFERIVGMSMKYRPAR- 264
            +TL V+A+G++   +F+ +L  LR+        + D+ + A LF  ++ +   Y  AR 
Sbjct: 208 LTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGAKLFRHLIDLPTAYFHARR 267

Query: 265 VGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFMVIAIIGGHLVWIPVLAFPIALLI 324
           VG     + E +++R FL + ++T ++D+ F+++   V+ +  G L  + V + P   L+
Sbjct: 268 VGDSVARVRELENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGWLTLVVVGSLPFYFLV 327

Query: 325 GYALQKPLVATMERTMALGAERQSSLIETLAGLDAVKVNNAESERQYQWEQTIGTLSRLE 384
              +   L A ++++   GAE Q+ L+E + G+D +K    E +   +W   +       
Sbjct: 328 SLVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQVTRRWNDQLAAYVSAS 387

Query: 385 LRVKMLSGLAMNITLLIQQLAGVIMIVFGVYLIIAGNLSMGGLVACYMLSGRALSPLASL 444
            + + LS LA     LI +L  V  +  G  L+I G L++G L+A  ML+GR   P+  L
Sbjct: 388 FKTQNLSSLANESVGLIGKLVTVATLWLGARLVIEGALTVGELIAFNMLAGRVSQPIIRL 447

Query: 445 SGLLTRYQQARVTMTSVDQMMELPQERNFDERPLSRKVLQGAVECRQLNFTYPNQQNPAL 504
           + L T +QQ  V++  +  ++    E N  +  +    L G +E  ++ F Y       +
Sbjct: 448 AQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGTVL-PTLVGQIELDRVCFRYRPDGGEVV 506

Query: 505 KNINLVIKPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDGALLVDGVDIRQIDVSELRYNI 564
           ++++L I  GE IG++GRSGSGKS+L +L+  LY P+ G +L DG D+   DV+ LR  I
Sbjct: 507 RDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLPDGADLAVADVASLRRQI 566

Query: 565 GYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELAGVHEFARLHPQGYELQVGERGQN 624
           G V QD  L   T+R+N+  G      E V+ AA LAG HEF    P GYE  +GE G +
Sbjct: 567 GVVLQDNVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDGYETLIGEHGAS 626

Query: 625 LSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERLKQRLAAVVENKTVLLVTHRAS 684
           LSGGQRQ +A+ARAL  NP IL+ DE TSA+D   E  ++Q +A +   +TV+++ HR S
Sbjct: 627 LSGGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNMARICAQRTVIIIAHRLS 686

Query: 685 LLSLVDRLLVIDRGQILADG 704
            +   DR++V++RGQI+  G
Sbjct: 687 AVRHADRIVVMERGQIIEQG 706



 Score = 25.8 bits (55), Expect = 0.008
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 682 RASLLSLVDRLLVIDRGQILADGPKAAVME-ALKKGQISV 720
           +++L  L+ RL   +RG++L DG   AV + A  + QI V
Sbjct: 529 KSTLTRLIQRLYSPERGRVLPDGADLAVADVASLRRQIGV 568