Pairwise Alignments

Query, 428 a.a., Outer membrane porin, OprD family from Pseudomonas fluorescens FW300-N2E2

Subject, 437 a.a., Outer membrane porin, OprD family from Pseudomonas fluorescens GW456-L13

 Score =  284 bits (727), Expect = 3e-81
 Identities = 176/432 (40%), Positives = 238/432 (55%), Gaps = 46/432 (10%)

Query: 25  AESKGFVEDSSLKVLLRNAYINRDYKD---GNQDKAEWGQAAIGTFSSGFTQGTVGVGVD 81
           A   GFVEDSSL +  RN Y  R+  +   G   + EW    +  + SG+TQGTVG GVD
Sbjct: 24  APDNGFVEDSSLTLTNRNFYFYRNNLNNPGGQNYREEWAHGLMLDYRSGYTQGTVGFGVD 83

Query: 82  AFGLYALRLDGGKGRSGAGGIDFFKQGDSGNAADDLSKFGAAVKFRVSNTVLAYGDQMPA 141
           A+    L+LD G+GR+G G         +G A D+ S+ G A+K R+S T L YG+  P 
Sbjct: 84  AYAQLGLKLDSGRGRTGTG---LLPVDSNGRAEDEYSEAGGALKARISKTELKYGNLTPL 140

Query: 142 LPVLSYDNSRLLPESYTGTLITSKEIKGLELNAGRFTAESRKSAEGRDSGGLK------- 194
            PV    ++RL      G  +TS E+KGL+L+AG FT+    SA   D G LK       
Sbjct: 141 NPVFGTGSARLFTTYANGFQLTSSELKGLQLDAGHFTS-GNDSASTNDDGALKALYAGVE 199

Query: 195 --SINVLGGSYQFTEQFKASLYASDVEDVLKKQYVNANYVFPLAKDQSLTLDFNGYRTKL 252
             S++ LGGSY   +Q   SLY S   D+ ++ Y NANY + L+++QSL LDFN YRT  
Sbjct: 200 TRSVDYLGGSYALNDQLSVSLYGSQFADIWRQYYANANYSYALSENQSLNLDFNLYRTN- 258

Query: 253 DNSYVRENNVTGDDNKIWSLAATFATGPHSFTLAHQRSTGDSNLGYAYGGYQREQNRVGD 312
           D+       +   DN  WSLAA +  G H  TLA+QR  GD    Y   G+ ++      
Sbjct: 259 DSGQSLAGKI---DNTTWSLAAAYKVGAHRVTLAYQRVDGDEPFDYL--GFDQQP----- 308

Query: 313 GGNTIYLANSYW-SDFNAEDERSWQLGYGLDFTTFGVPGLTYNVAYVRGDNITTSTSEGG 371
            G +I+LANS    DFNA +ERSWQL Y LD   FGVPGL++   YV GD+I  S  +GG
Sbjct: 309 -GTSIFLANSVQILDFNAPNERSWQLRYDLDMAPFGVPGLSFMSRYVSGDHIDDSHYDGG 367

Query: 372 T--------------EREIFNQFKYVVQSGPAKDLSVRLRSSVLR-VSQKSSEYNVSGNE 416
                          ER++  + +YVVQ G A+DLS+R+R + +R   Q +       NE
Sbjct: 368 PNGAYGRYGSDGKRWERDL--EARYVVQEGKARDLSIRVRQASIRSTGQVARADTTDNNE 425

Query: 417 LRVFVDYPINVF 428
           +RV V+YP+N+F
Sbjct: 426 VRVIVEYPLNIF 437