Pairwise Alignments

Query, 188 a.a., Type IV pilus biogenesis protein PilN from Pseudomonas fluorescens FW300-N2E2

Subject, 184 a.a., fimbriae biosynthesis protein from Pseudomonas simiae WCS417

 Score =  137 bits (344), Expect = 1e-37
 Identities = 76/183 (41%), Positives = 110/183 (60%), Gaps = 3/183 (1%)

Query: 3   RINLLPWREELREERRKRFLLALVGALVGAVGVVLVAVRYFDSAIDHQVARNSHLSEQIA 62
           RINLLPWR+ L E RRK  L  L+     A+  V +A +  D AID QV RN HL ++I 
Sbjct: 4   RINLLPWRQALAERRRKYLLACLLAFACAALAAVWLADQVIDRAIDRQVTRNDHLGKEIV 63

Query: 63  VLDERIKQISELKARRQQLVERMRIIQDLQGNRPVSGRIFDQLVRTLPDGVYFTEVKMED 122
            LD RIK I +L+ + QQL +RM+++QDL   R    ++ DQL R +PDGV+  EV  + 
Sbjct: 64  GLDSRIKTIDDLQEQSQQLAQRMKVVQDLHDARSSGAQLLDQLARAVPDGVHLHEVVAKG 123

Query: 123 RTLLIKGAAESNNRVSDLMRNLDSSDLFDTPSLTEVKATTAGQLDQANVFQLTVRQTRPA 182
            T+ I G+AES+  ++ LMR L++++   +  L  V+   A   +Q   FQL VRQ   +
Sbjct: 124 DTVSISGSAESSQDIAQLMRRLEAAEGAHSTRLQHVRTDGARGNNQ---FQLMVRQGESS 180

Query: 183 DAE 185
           +A+
Sbjct: 181 EAQ 183