Pairwise Alignments

Query, 282 a.a., General secretion pathway protein K from Pseudomonas fluorescens FW300-N2E2

Subject, 311 a.a., putative type II secretion protein GspK from Escherichia coli BL21

 Score = 54.3 bits (129), Expect = 3e-12
 Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 51/296 (17%)

Query: 12  VLLVLSLALLFTAGMLRSHRLLLQSSAQQLQHVQLRQLGLAAEAWAQAVLEGSAITSSGP 71
           +L++L++ +L T  +    +  L  +  Q ++ Q      +AE+ A + L  S + +   
Sbjct: 1   MLVLLAVMMLVTITLSGRMQQQLGRTRSQQEYQQALWYSASAESLALSALSLS-LKNEKR 59

Query: 72  VDLSQDWARLKPAFEMEDAEVHIDIEDLSGRLNLNALLAQGQTDQ--VTLGRWTRLLALL 129
           V L+Q WA     F +   ++ + + D     NLNAL AQ  T    + + +   L+  L
Sbjct: 60  VHLAQPWASGPRFFPLPQGQIAVTLRDAQACFNLNAL-AQPTTASRPIAVQQLIALITRL 118

Query: 130 ELPALSLPQVG-----------SVQ-------------------------ELSQLRLLPG 153
           ++PA     +            SVQ                         ++S++R++ G
Sbjct: 119 DVPAYRAELIAESLWEFIDEDRSVQTRLGREDSEYLARSVPFYAANQPLADISEMRVVQG 178

Query: 154 IDGQTLRRLEPWVVVLPRD-ALVNINTAPLPVLMSLDGMEDE-----VAKVLINQRRHRP 207
           +D    ++L+P V  LP     +NINT  +   + L+ + D       A+VL+ QR  + 
Sbjct: 179 MDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFDPWLSPVQARVLLQQRPAKG 238

Query: 208 YASVQAFTNDPLLSGVGIGSHG-----LGVSSRWFRITVSVTRADSRLRLASDIER 258
           +  V  F   PLL+ V   +       L V S +F +   +T  +  L + S I R
Sbjct: 239 WEDVDQFLAQPLLADVDERTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVR 294