Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator YnfL from Pseudomonas fluorescens FW300-N2E2

Subject, 297 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  278 bits (712), Expect = 8e-80
 Identities = 149/288 (51%), Positives = 201/288 (69%), Gaps = 3/288 (1%)

Query: 1   MELRHLRYFIAVAEELHFGRAALALGISQPPLSQQIQALEQEIGARLFERTNRRVELSEA 60
           +ELRHLRYF+AVAEELHFGRAA  L ISQPPLSQQIQALEQ+IGARL  RTNR V L+ A
Sbjct: 3   IELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAA 62

Query: 61  GRLFLEEARRVLVQVDKAADVARRAQLGELGELKIGFTSSAPFNSTIPQAIFSFRQRFPA 120
           G+ FL ++R++L  VD AA  A R   GE GEL+IGFTSSAPF   +   +  FR+ +P 
Sbjct: 63  GKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYPD 122

Query: 121 VHLNLREMSSTQVADALVDEVIEVGIMRPLPLPDALREIELSREPLVAVLSAKHPLAQGN 180
           VHL  REM++ +    L++  +++G++R   LP++L    +  EPL+A++   HPLA  N
Sbjct: 123 VHLQTREMNTREQIAPLIEGTLDMGLLRNTALPESLEHAVIVHEPLMAMIPHDHPLA--N 180

Query: 181 EEGLFLSALAQEPFVFFPRSYGSGLYAQLLNLARDAGFSPHFAQEAGEAMTIIGLVAAGL 240
              + L+ LA+EPFVFF    G+GLY  +L L R    +P   QE GEAMTIIGLV+AGL
Sbjct: 181 NPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGL 240

Query: 241 GVSVLPASYQRMRIDGVVYRPLLDPAAVSAVWLVQRK-DQRSPMAKGF 287
           GVS+LPAS++R++++ + + P+ +  AVS +WLV  K  ++SP A+ F
Sbjct: 241 GVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNF 288