Pairwise Alignments

Query, 475 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Pseudomonas fluorescens FW300-N2E2

Subject, 485 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  264 bits (675), Expect = 4e-75
 Identities = 172/479 (35%), Positives = 243/479 (50%), Gaps = 82/479 (17%)

Query: 5   GMRFRAVVAVVGLLLTALAVDAVAE-TKVNSVRLWRAPDNTRLVFDLTGPVQHSVFTLTA 63
           G   R  +   G L+  L    +A    V +VR+W A D TR+  +    +Q   F +T 
Sbjct: 3   GALSRRTLLSTGTLVLLLGTQQIARGASVVAVRIWPAEDYTRVTIESDALLQAKQFFVTD 62

Query: 64  PDRLVIDINGASLGAPLN-----VATANTPITAMRSAQRTPTDLRVVIDLKKAVTPKSFT 118
           P RL +DI G  L   L      + + +  I  +R+AQ  P  +R+VIDLKK + P+ F 
Sbjct: 63  PPRLAVDIEGIDLLPGLRELVGKLKSDDPNIAGIRAAQNAPNVVRLVIDLKKPIKPQVFN 122

Query: 119 LAPNAQYGNRLVVDLFD-NPAD----------------------------------ATPP 143
           L P A Y +RLV DL+  NP D                                  ATP 
Sbjct: 123 LEPVAAYQHRLVFDLYPLNPPDPLEQLIAQRMKDMDAASERAARLLGLEADKVTKPATPA 182

Query: 144 PPPTNVATV----PAVPVTPTE---PALKLPPAPAGKRD--------------------- 175
             P          P  PV+P +   P   +P  P G  D                     
Sbjct: 183 DDPLGELIAGRERPKTPVSPNQSPSPTTPVPKPPLGDSDDTAVAGAGPKGSPAKQPPGGK 242

Query: 176 ------IIVVIDAGHGGEDPGASGSRGQREKDVVLSIARELQRQVNGMK----GFRAELT 225
                 II+ +D GHGGEDPGA G  G +EK VVL IA +L+ ++N  +      RA +T
Sbjct: 243 GKTERLIIIALDPGHGGEDPGAIGPNGTQEKRVVLQIAHKLRERINETRVNGNPMRAFMT 302

Query: 226 RTGDYFIPLRGRTEIARKKGADLFVSIHADAAPSAAAFGASVFALSDRGATSETARWLAD 285
           R  D+F+PL+ R + A++  ADLF+SIHADA  +    GASV+ALS RGATS  A+W+AD
Sbjct: 303 RDKDFFVPLQVRVQKAQRVQADLFISIHADAFLTPRPQGASVYALSTRGATSTAAKWMAD 362

Query: 286 SENRSDLIGGAGNVSLDDKDRMLAGVLLDLSMTASLTSSLNVGQKVLSNIGRVTPLHKQR 345
            EN +DL+GG   +++   D  +   L D+S TA +  SL +G  +L ++ ++  LHK +
Sbjct: 363 KENAADLVGG---LNVKAADAHVRRALFDMSTTAQINDSLKLGSAMLGHVKKIGKLHKPQ 419

Query: 346 VEQAGFMVLKSPDIPSILVETGFISNANEASKLSSANHQQALARSISSGVRQFFQQNPP 404
           VEQA F VL++PDIPS+LVET FISN +E  +L+   +Q  LA ++  G+  +F +NPP
Sbjct: 420 VEQANFAVLRAPDIPSVLVETAFISNPDEEKRLNDPKYQDDLADALVRGIVAYFSKNPP 478