Pairwise Alignments

Query, 335 a.a., tRNA dihydrouridine synthase B (EC 1.-.-.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 344 a.a., tRNA dihydrouridine synthase B (EC 1.-.-.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  360 bits (925), Expect = e-104
 Identities = 192/316 (60%), Positives = 230/316 (72%), Gaps = 7/316 (2%)

Query: 4   VRIGPYTLQNGLVLAPMAGVTDQPFRQLCKRLGAGLVVSEMVTSDMSLWNTRKSRLRMIH 63
           +++G +TL N L +APMAGVTD+PFR+LCKRLGAG  VSEMVTS   L ++ K+  R  H
Sbjct: 1   MQLGAFTLPNALFVAPMAGVTDRPFRKLCKRLGAGYAVSEMVTSRPDLQDSLKTSRRANH 60

Query: 64  EGDPEPRSVQIAGGDAQMLAEAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKDEAL 123
           EG+  P SVQIAG DAQM+A+AAR N++ GAQIIDINMGCPAKKVCNK AGSAL++DEAL
Sbjct: 61  EGEAAPISVQIAGTDAQMMADAARYNIDRGAQIIDINMGCPAKKVCNKWAGSALMQDEAL 120

Query: 124 VTEILQAVVAAVD---VPVTLKIRTGWDRENKNGLVVAKIAEQAGITALAVHGRTRADLY 180
             EI+QAVVAA +   VPVTLK+RTGW    +N   +A  AE AG+  L VHGRTR   Y
Sbjct: 121 AIEIVQAVVAACEPHGVPVTLKMRTGWCASVRNAPTLALAAEAAGVQMLTVHGRTREQGY 180

Query: 181 TGDAEYDTIAAIKQAVSIPVFANGDIDSPEKARYVLDATGADGLLIGRAAQGRPWIFREI 240
            G AE+DT+A IK  V IPV ANGDIDSPE+AR VL  TGAD +++GRAAQGRPWIFREI
Sbjct: 181 KGQAEHDTVAHIKSRVRIPVVANGDIDSPEQAREVLRRTGADAIMVGRAAQGRPWIFREI 240

Query: 241 EHFLRTGEKLAAPQLSEVERILLEHLAALHAFYGEVMGVRIARKHVGWYLATLP----GA 296
            HFL TGE L  P L++V   LL+HL   +  YGE  GVR ARKH+GWY  +LP     A
Sbjct: 241 AHFLATGEHLPPPDLADVRVWLLDHLHDHYDLYGEDTGVRSARKHLGWYAQSLPLPPGAA 300

Query: 297 REFRARFNRLDGTQAQ 312
             FR+R N +   +AQ
Sbjct: 301 ALFRSRVNAVTTVEAQ 316