Pairwise Alignments

Query, 184 a.a., FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

Subject, 176 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  130 bits (327), Expect = 1e-35
 Identities = 72/151 (47%), Positives = 101/151 (66%), Gaps = 3/151 (1%)

Query: 28  LYRSHHSWLHSWLSRRIGCHESAADLAQDTFVRLLKS--RQSGPLREPRAYLSSIARGLM 85
           LY +HH WL   L RR+     AADLA DTF+R+L     ++ P+R+ R+YL++IARGL 
Sbjct: 14  LYGTHHGWLLGLLRRRLNDRWDAADLAHDTFIRILSRPPAETDPVRQ-RSYLATIARGLC 72

Query: 86  IDRYRRRELERAYFESLALLPPQEAPSEEERLLILDSLERIDRLLDLLKPRVREAFLLAQ 145
           ID +RRR+LER + ++LA  P    PS E+R +I+++L  +D +L  L  +V EAFLLAQ
Sbjct: 73  IDHWRRRQLERTWLQTLAERPEALQPSPEQRAIIVETLVEVDAMLARLPKKVSEAFLLAQ 132

Query: 146 LDGLTCLQIAEKLCVSRSTVERDLAKALQHC 176
           L GL   QIAE+L V    V++ +A+AL HC
Sbjct: 133 LHGLPYKQIAEQLGVGERMVKKYMAQALLHC 163