Pairwise Alignments

Query, 184 a.a., FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

Subject, 171 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  238 bits (607), Expect = 4e-68
 Identities = 123/170 (72%), Positives = 137/170 (80%)

Query: 14  MRSNDSLGDADLALLYRSHHSWLHSWLSRRIGCHESAADLAQDTFVRLLKSRQSGPLREP 73
           M S+  L  A +  LY +HH+WL  WLSRR GC E AADLAQ+TFVRLL +R+   L++P
Sbjct: 1   MSSDHPLDHAAIGQLYHAHHAWLRGWLSRRTGCREHAADLAQETFVRLLNARRQQTLQQP 60

Query: 74  RAYLSSIARGLMIDRYRRRELERAYFESLALLPPQEAPSEEERLLILDSLERIDRLLDLL 133
           RAYLSSIAR LMID+YRRRELERAY ESLA  P  E PSEE RLLILDSLERIDRLLD L
Sbjct: 61  RAYLSSIARSLMIDQYRRRELERAYLESLAHFPQVEVPSEETRLLILDSLERIDRLLDQL 120

Query: 134 KPRVREAFLLAQLDGLTCLQIAEKLCVSRSTVERDLAKALQHCYRLRYAE 183
           KPRVREAFLLAQLDGLTC QIA +L VS++TVERDL+KAL  CYRLRY E
Sbjct: 121 KPRVREAFLLAQLDGLTCAQIALRLGVSKATVERDLSKALHACYRLRYVE 170