Pairwise Alignments

Query, 227 a.a., Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps from Pseudomonas fluorescens FW300-N2E2

Subject, 217 a.a., amino acid ABC transporter permease from Rhizobium sp. OAE497

 Score =  127 bits (318), Expect = 2e-34
 Identities = 73/205 (35%), Positives = 115/205 (56%)

Query: 19  LLLGARVSAELSLTGFALAAMLGALLAWAMKSHSVWLKHAAVFFIQGMRAVPLLALLLAL 78
           LL G   +  LS   F L  + G  +  A  S   WL+  A+ +IQ ++  PLL  +  L
Sbjct: 13  LLDGLLWTVVLSALAFVLGGIAGFFVMLARISRFRWLRRTALVYIQIVQGTPLLIQMFLL 72

Query: 79  YFTLPSLGLTLSGYWAGAIGLGLQGSAYVAEILRGGLDSLHRGQREAAIATGLTPLQAFT 138
           YF L   G+++    A  +G+ +  S+Y+ EI RG ++S+ + Q EAA   GLT  QA  
Sbjct: 73  YFGLGVFGISVPPLVAAGLGMMVYSSSYLGEIWRGAVESIAKTQFEAAECLGLTRWQALR 132

Query: 139 AVIFPQAIRGMLPPLLNAYVSILKDSSLCALIATDELMLAARAIASESFLPMHIFLLVGL 198
            VI PQA++   PP +   V ++K++SL +++   EL  AA+ I +  F P  +F +  L
Sbjct: 133 DVILPQALKIATPPTVGFLVQLVKNTSLASVVGFLELTRAAQVINNSLFQPFLVFGVAAL 192

Query: 199 FYFVIAFPLSLLSRALEARFSRGRK 223
           FYF + +PLS+ SR+LE + + GR+
Sbjct: 193 FYFCVCYPLSVWSRSLERKLNAGRR 217