Pairwise Alignments

Query, 493 a.a., Transcription termination protein NusA from Pseudomonas fluorescens FW300-N2E2

Subject, 499 a.a., Transcription termination protein NusA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  496 bits (1277), Expect = e-145
 Identities = 256/493 (51%), Positives = 354/493 (71%), Gaps = 4/493 (0%)

Query: 1   MSKEVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFR 60
           M++E+L++++++S EK V  +V+  A+ELALA+ATKK ++ +VD+RV ++  TGAYETFR
Sbjct: 1   MNREMLMLIDAISREKNVERDVVLGAVELALASATKKLYKGDVDIRVAMDPDTGAYETFR 60

Query: 61  RWTVV-EEADLDDPAIETWPSKVAETHPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQK 119
           RW VV +EA L +P  E   S   E     + GD +E+ +ES+  GRI A  AKQVI+QK
Sbjct: 61  RWLVVPDEAGLQNPDAEEMLSDAREELADIEEGDYIEKPVESVPIGRIGAMAAKQVILQK 120

Query: 120 VREAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGV 179
           +R+AER  +++ +  R  +I  GTVK++ + ++IV+ G   E  L R ++I +E FR G 
Sbjct: 121 IRDAEREMLLNDFMSRGDKIFVGTVKRMDKGDLIVESGR-VEGRLKRGEMIPKENFRTGD 179

Query: 180 RLRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIA 239
           R+RA++ E+    RG  ++LSR+AP  +IELFR EVPEI +GL+E+   +RDPGSRAKIA
Sbjct: 180 RVRAMIMEVDLTLRGAPILLSRSAPSFMIELFRQEVPEIEQGLLEIKTCARDPGSRAKIA 239

Query: 240 VRSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAII 299
           V S DKRIDP G C+G+RGSRV  V+ EL GERVDIVLW ++PAQFVI A++PA V +I+
Sbjct: 240 VHSFDKRIDPIGTCVGVRGSRVNGVTNELAGERVDIVLWSEDPAQFVIGALAPANVVSIV 299

Query: 300 VDEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILR 359
           VDE+ HAMD+ V  +NLA AIGRGGQNVRLAS+LTGW +N+MT  +   KQ  E   I +
Sbjct: 300 VDEERHAMDVVVDEENLAIAIGRGGQNVRLASELTGWRINIMTADESAQKQAEEADGIRK 359

Query: 360 NFIEELEVDEELAQVLVDEGFTSLEEIAYVPVEEMLNIDGFDEEIVNELRARAKDRLLTK 419
            F+ +L+VD+E+A +L++EGFTSLEE+AYVP++EML I+ FDE+ VNELR RAKD LLT 
Sbjct: 360 VFMAKLDVDQEIADILIEEGFTSLEEVAYVPLQEMLEIESFDEDTVNELRTRAKDALLTM 419

Query: 420 AIATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDR 479
            IA EE + +   ++DL  LEG+  +L  +LA  GV TR++LA+ + D+L DI     + 
Sbjct: 420 EIAREESVEEV--SQDLRDLEGVTPELIAKLADAGVHTRDELADLATDELTDITAQTPEE 477

Query: 480 AGKLIMAARAHWF 492
           A  LIM ARAHWF
Sbjct: 478 ATALIMLARAHWF 490