Pairwise Alignments

Query, 341 a.a., ABC transporter, ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 315 a.a., Efflux ABC transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  129 bits (325), Expect = 8e-35
 Identities = 86/240 (35%), Positives = 139/240 (57%), Gaps = 24/240 (10%)

Query: 1   MDSISVRNLSKTYRIKERSERAFGWLKDLVSPKTSEKTAVDDISFTVKQGEVVGFLGPNG 60
           M +IS +++SKTY    + ++A G        K   K AVD++SF ++ GE  G LGPNG
Sbjct: 1   MPAISFQSVSKTYP-PSKQQKAQG--------KQGLK-AVDEVSFQIEPGEFFGLLGPNG 50

Query: 61  AGKTTTLKMLSGLLYPTVGQISVLGHKPQLRSKEFLKSISLIMGQRQQLIWD--LPAMET 118
           AGKT+ + ML+GL  PT G +SV G   Q    E  + + ++    Q+L++D      E+
Sbjct: 51  AGKTSLISMLAGLSRPTSGTVSVHGFDVQRDYAEARRQLGIV---PQELVFDPFFNVRES 107

Query: 119 FRLNQKIFEIPDAQFKKTYGYLDELLQ---VSKLAKAPVRTLSLGEKMKCELVASLLHDP 175
            R+    F I     K    ++DELLQ   ++  A A +R LS G K +  +  +L+H P
Sbjct: 108 LRIQSGYFGI-----KNNEAWIDELLQSLGLADKATANMRQLSGGMKRRVLVAQALVHKP 162

Query: 176 KVLFLDEPTIGLDVGVQKIVRSFIRDYSRERNVSVLLTSHYMQDIEALCERVVVVSDGKI 235
            V+ LDEPT G+DV +++ +  F+   +++ + +VLLT+HY+++ EALC R+ ++  GK+
Sbjct: 163 PVIVLDEPTAGVDVELRQTLWQFVARLNKQGS-TVLLTTHYLEEAEALCSRIAMLKLGKV 221