Pairwise Alignments

Query, 341 a.a., ABC transporter, ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 578 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  119 bits (297), Expect = 3e-31
 Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)

Query: 30  VSPKTSEKTAVDDISFTVKQGEVVGFLGPNGAGKTTTLKMLSGLLYPTVGQISVLGHKPQ 89
           ++ K  +  A D ++F VK+GE+ G LGPNGAGK+TT KM+ GLL PT GQ  VLG   +
Sbjct: 335 LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLK 394

Query: 90  LRSKEFLKSISLIMGQRQQLIWDLPAMETFRLNQKIFEIPDAQFKKTYGYLDELLQVSKL 149
             S +  + +   M Q+  L  +L   +  R    ++ +      +    + E   +  +
Sbjct: 395 ESSGKARQHLG-YMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSI 453

Query: 150 AKAPVRTLSLGEKMKCELVASLLHDPKVLFLDEPTIGLDVGVQKIVRSFIRDYSRERNVS 209
           A      L LG K +  L  SL+H+P +LFLDEPT G+D   ++     I     E+ V+
Sbjct: 454 ASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMV-EKGVT 512

Query: 210 VLLTSHYMQDIEALCERVVVVSDGKISFDDTLESLRKRMSD 250
           V++T+H+M + E  C+R+ +V  GK+    T + L+ + ++
Sbjct: 513 VMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSAN 552



 Score =  103 bits (257), Expect = 1e-26
 Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 6/288 (2%)

Query: 36  EKTAVDDISFTVKQGEVVGFLGPNGAGKTTTLKMLSGLLYPTVGQISVLGHKPQLRSKEF 95
           +K AV  +  T+  G V G +GP+GAGKTT ++ML+GLL P  G  +V+G  P +++   
Sbjct: 19  DKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDP-IKNDGA 77

Query: 96  LKSISLIMGQRQQLIWDLPAMETFRLNQKIFEIPDAQFKKTYGYLDELLQVSKLAKAPVR 155
           L ++   M Q+  L  DL  ME   L   +  +     K+T+  L E   +         
Sbjct: 78  LHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAG 137

Query: 156 TLSLGEKMKCELVASLLHDPKVLFLDEPTIGLDVGVQKIVRSFIRDYSRERNVSVLLTSH 215
            LS G K K  L  +L+ +PKVL LDEP +G+D   ++ +   + + + E  + +L ++ 
Sbjct: 138 KLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGE-GMLILWSTS 196

Query: 216 YMQDIEALCERVVVVSDGKISFDDTLESLRKRMSDHRIITVELSENIVASALGRYGLVRS 275
           Y+ + E  C  V+++++G++ +    ++L + M+    +     E           L + 
Sbjct: 197 YLDEAEQ-CRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQV 255

Query: 276 TDGFVH---EMLVPAAEVVAVCSRVLAEQPVIDISIGDPPIEEALLKL 320
           +DG +      L+   E      R     P I+I+   P  E+A + L
Sbjct: 256 SDGMIQGKSVRLILKKEATPDDIRHADGMPEININETTPRFEDAFIDL 303