Pairwise Alignments

Query, 333 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Pseudomonas fluorescens FW300-N2E2

Subject, 274 a.a., diaminopimelate epimerase from Pectobacterium carotovorum WPP14

 Score = 50.1 bits (118), Expect = 6e-11
 Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 37/238 (15%)

Query: 73  PFQNEPPFDLLIVNTDGTLAERSGNGLTIFSQALQEQGLMAGTGDCLLQVHHDKPDGLSP 132
           P+  E  F   I N DG+   + GNG   F++ ++ +GL             +K D    
Sbjct: 51  PYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT------------NKRDIAVS 98

Query: 133 LQTSVRAAEFEGAQGFWLDLGKPLFGPGAVGAQDVVRVMFNQCDVSRVAALERLNPAWGN 192
            QT          +   +++G+P F P  V  + V      + + + +   +      G 
Sbjct: 99  TQTGRMVLSVTDDELVRVNMGEPNFEPQQVPFRAV------KAEKTYIMRADEHTVLCG- 151

Query: 193 SQFVNIGNPHCVTLVDSAEALPSNPQMRAPALCQSLTRIAYAPPGGAGMPCPMGVNLQWA 252
              V++GNPHCV  V+  +   +  +   P L +S  R             P   N+ + 
Sbjct: 152 --VVSMGNPHCVIQVEDVDT--AKVETLGPLL-ESHERF------------PERANIGFM 194

Query: 253 WLEAEGRIAARVFERGEGPTASSGTSASAVACAAWRAGWVQAGPVSVMMPGGLRRFCW 310
            +     +  RV+ERG G T + G+ A A      + G + A  V V +PGG     W
Sbjct: 195 QIVDSHTVRLRVYERGAGETQACGSGACAAVAVGIQQGLLSAN-VRVSLPGGELDIQW 251