Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) from Pseudomonas fluorescens FW300-N2E2

Subject, 378 a.a., putative enzyme (VIMSS) from Escherichia coli BW25113

 Score = 84.0 bits (206), Expect = 6e-21
 Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 21/270 (7%)

Query: 72  VVFLPKAKDLTDYILNAVAARLAGREVYLVGEKR-----SGIEGASKQLNPFGKPRKLDS 126
           ++ +PK   L +  L A+   +      + G K      S +E   K L P         
Sbjct: 111 LIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKK 170

Query: 127 AR--HCQLWQVTVANAPEATPLESLAQTYELPLAEGPLKVISLPGVFSHGRLDRGSALLL 184
           AR  +C   +  +A+AP         QT    L      + +   VFS   LD G+   +
Sbjct: 171 ARLINCTFNEPQLADAP---------QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFM 221

Query: 185 EHLDKLPSGHLLDFGCGAGVLGAAVKRRYPHNTVTLLDVDAFAAASSRLTLAANGLEA-- 242
           +HL +   G ++D GCG GV+G  +  + P   V  +D    A ASSRL +  N  EA  
Sbjct: 222 QHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALD 281

Query: 243 --EVLTGDGIDAA-PMGLSAILSNPPFHVGVHTDYHATENLLRKAAKHLKNGGELRLVAN 299
             E +  + +    P   +A+L NPPFH       +    +   A + LK  GEL +VAN
Sbjct: 282 RCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 341

Query: 300 SFLKYQPLIEEHLGVCAIKAEGQGFRIYRA 329
             L Y   +++  G C   A    F + +A
Sbjct: 342 RHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371