Pairwise Alignments

Query, 863 a.a., Transcriptional regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

Subject, 919 a.a., Regulatory protein, LuxR:Tetratricopeptide TPR_4 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  223 bits (569), Expect = 3e-62
 Identities = 246/891 (27%), Positives = 384/891 (43%), Gaps = 59/891 (6%)

Query: 1   LLLVSAPAGFGKSSLAVEFCQSLP-AHWQSLWLGLSARDNDPGRFLERLLEGLQAFFPQL 59
           L+L+ APAGFGK+++ ++       A   + WL L   DND GRFL  L   L+   P L
Sbjct: 58  LVLLRAPAGFGKTTVMLQVRHRFEEAGLPTAWLTLDRADNDVGRFLTVLAAALEPLVPGL 117

Query: 60  GGRALGLLKMRQRHQPFA-FEEWLDGLLDELSTHLSPHEPLLLVLDDYHLAQSPVLDRCL 118
                     R R  P    EE    ++D ++ H +P     L LDD+   Q+PV    +
Sbjct: 118 A---------RARGAPVGNLEELAFSVIDHVAAHPAP---FALFLDDFEALQNPVALGLV 165

Query: 119 QFFLNHLPDGLLVLVTSRQRPDWHLARLRLSRQLLELNEQDLRLTHEEALTLLQHHSSS- 177
              ++ LP G  ++V SR  P+  L RLR   +LLE++   LR +  E    L+      
Sbjct: 166 NELIDQLPRGAQLIVGSRGAPELSLGRLRARGRLLEIDPAQLRFSVSETEGFLRERRGLV 225

Query: 178 LRGEALENLIQRSEGWVAGLRFWLLAASEAGTEGLLPQALHGGEGLIRDYLLEEVIDCLP 237
           L  E +  L + +EGW A L    ++       G       G    + DYL+E+V+    
Sbjct: 226 LESEDIVRLHRSTEGWAAALWLASVSLEHRDHPGPFIAGFTGSNAAVVDYLVEDVLARQT 285

Query: 238 AEVQAFLYDTAPQERFCSELCDAVREAHDSAEILRYLAAHQVFLVPLDEHGHWYRYHHLF 297
            +V+ FL  ++      + LC+ +    DSA +LR L    +FL+PL   G  YRYH +F
Sbjct: 286 EDVRGFLLRSSVLAVLNASLCNLICGREDSAAMLRSLEQSHLFLIPLQPEGSGYRYHGMF 345

Query: 298 SDLLRSRPSAPAMVPAATLHLRACRWFNAQGLIDEAVEQALRAGHLDVAANLVQNLSEEQ 357
           ++ LR++           LH  A RWF  QG    A+E AL AG +  A  L+ N   + 
Sbjct: 346 AEFLRAQLQRQYPDEVPGLHRAAARWFLGQGRPVPAIEHALAAGDVRTALPLL-NQHAQA 404

Query: 358 LLAEQNVGMLLRWKMDLPD-SLLISTPRLIVLYSWALGLACQLDAAEELAAHLSRFLPAP 416
           LL +  + +L RW   L +  LL   P L V+++WA+  A    AA  L   L R     
Sbjct: 405 LLDQGRMRLLSRWLDPLLERGLLDEHPMLQVVHAWAVCFARGPLAAAPLLERLER----- 459

Query: 417 SATAQKSMLAQWLALSGI--VARGRGDRETTVRYCSEALESLPQKRYGQRLMCLSTLSNL 474
            A   + + A  LA+  +  V   R D  T +   S  L +LP      R      L+NL
Sbjct: 460 RADPDEEVGAHRLAMKPLFMVLTDRTDEATEL--ASALLGALPSHVSFVRGFLEIILANL 517

Query: 475 AIADGDLWRARNLNRDSLELAQRVGNPLFE-ALAHYDRARVLQARGEILRALDEVHQGLQ 533
           A+  G    A     D+    Q      F   L+    A V   +G + +AL  +   + 
Sbjct: 518 AMIAGRYHEALRY-ADAARSRQPEHRSSFNFTLSEAAEAAVDLTQGRLRKALARLRLAVN 576

Query: 534 R-LHKLSPQRLYAVRARLIMYEGFLLTLRMQPQAGLARLQAGLTEARACRDISVLIGHCV 592
              H           A +++ E      ++     L  +   L       D  +++ H V
Sbjct: 577 AGTHDAGRTTNGNAMAGVLLAEALFEADQLDQAERLLAVYIPLIRHVGIPD-QLILAHVV 635

Query: 593 IARIEGYSGEFARAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLAQGRTDLAEAWL 652
           +ARI    G+   A   LAE E L H   +P +  +A   L +  + + +GR   A A +
Sbjct: 636 MARIAQDQGDSDHALQLLAELEHLGHRDGLPRV--VAGARLERVRMLVTEGRLGRARAEI 693

Query: 653 ARLGQTYTGERAA-APPEFHPQLPLHVELQQAVLESIRGQPILAQGRLDA-LLEHGQQSG 710
              G      R + +    +    L +   +  +++     ++A+ R +    E  Q+  
Sbjct: 694 DHCGDKALWARVSRSSLRANEVETLALAHARWAVQAGHAAEVVAELRAEVDAAERAQRER 753

Query: 711 RQMLSVMALNQKVALLLSIGREAEARRTLAQA--FEAASGGVLQPFEWLFGEHREWLREQ 768
           R M   + L Q       +G    A R LA+A  F AA G V     +L       +  Q
Sbjct: 754 RAMTLRLVLAQ---AQYKLGERNRAMRVLAKAVCFGAAEGYVR---AFLVEGPLLLVMLQ 807

Query: 769 LLQAPPSTLRE-------HLLERL---------PSTVAQPADP-AAPVETLSSRERAVLQ 811
            L++ P+ L +         L+RL         P  VA  A P A+ ++ L+ +E  VL+
Sbjct: 808 ELRSGPTDLLDADGGAPIAFLDRLLRAPVAPLPPPAVAGAATPSASAIDALTKKELQVLR 867

Query: 812 LIAQGCSNQEISEQLFISLHTVKTHASHINSKLGVERRTQAVARAKALGLL 862
           L+A+G SN +I E++F++  T++TH  +IN KL    R +AV  A+  G L
Sbjct: 868 LVAEGLSNDQIGERMFVAETTIRTHLRNINVKLDTRNRMEAVQVARRAGWL 918