Pairwise Alignments

Query, 863 a.a., Transcriptional regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

Subject, 899 a.a., Regulatory protein, LuxR:Tetratricopeptide TPR_4 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  248 bits (633), Expect = 1e-69
 Identities = 267/901 (29%), Positives = 377/901 (41%), Gaps = 80/901 (8%)

Query: 1   LLLVSAPAGFGKSSLAVEFCQSLPAHW-QSLWLGLSARDNDPGRFLERLLEGLQAFFPQL 59
           L+LV APAGFGK++L  +  Q L A    + WL L + DNDP RFL  L   L    PQ 
Sbjct: 39  LVLVRAPAGFGKTTLMTQARQRLMADGVATAWLTLDSADNDPSRFLAYLAGALDELSPQE 98

Query: 60  GGRALGLLKMRQRHQPFAFEEWLDG--LLDELSTHLSPHEPLLLVLDDYHLAQSPVLDRC 117
           GG           H P        G   L  +    S   P    +D++ + +SP +   
Sbjct: 99  GG-----------HDPAGTATVPIGEVALALMERTASLPFPFAFFIDEFEVVRSPGVMAL 147

Query: 118 LQFFLNHLPDGLLVLVTSRQRPDWHLARLRLSRQLLELNEQDLRLTHEEALTLLQH-HSS 176
           L  FL  +P G  +++ SR  PD  LARLR S QL E++ Q LR + +E         + 
Sbjct: 148 LAQFLECVPAGSRLVIGSRNVPDLRLARLRASGQLQEIDVQKLRFSLDETRRFFDTLGTQ 207

Query: 177 SLRGEALENLIQRSEGWVAGLRFWLLAASEAGTEGLLPQALHGGEGLIRDYLLEEVIDCL 236
           +L  E L  L  ++EGWVA L    LA            A  G E  + +YL EEV+   
Sbjct: 208 ALGSEDLGILHAKTEGWVAALWLASLALERHQYRRDFIAAFSGTEDSLAEYLAEEVLAQQ 267

Query: 237 PAEVQAFLYDTAPQERFCSELCDAVREAHDSAEILRYLAAHQVFLVPLD-EHGHWYRYHH 295
           P +V+  L  T+    F + LC A+    DS  ILR LA   VFL+P++   GHW RYH 
Sbjct: 268 PPDVRQLLLSTSILREFSAPLCAALLPGMDSESILRQLAGANVFLIPIEGRPGHW-RYHS 326

Query: 296 LFSDLLRSRPSAPAMVPAATLHLRACRWFNAQGLIDEAVEQALRAGHLDVAANLVQNLSE 355
           LFS  LR +           LH  A RWF AQ     AV+  + AG    AA  V+ L  
Sbjct: 327 LFSSFLRGQLQRERPEAVPELHRAAARWFMAQERPVPAVDHYIAAGE---AAQAVEVLER 383

Query: 356 E--QLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLACQLDAAEELAAHL---- 409
           E   LL +  + +L RW   LP + L   P L V+Y W+        A+  L  +     
Sbjct: 384 EAMPLLMQGRLRLLTRWFDALPPAALKEHPLLQVVYLWSTCFTRGPQASLALMRNTGLEQ 443

Query: 410 --SRFLPAPSATAQKSMLA---QWLALSGIVARGRGDRETTVRYCSEALESLPQKRYGQR 464
                +    A  Q SMLA   +W     I  R      +T  + + AL ++        
Sbjct: 444 SDGPEIKVHVAALQASMLALLDRWEEAHAIGVRSLHLLPSTSAFANSALVNVTANG---- 499

Query: 465 LMCLSTLSNLAIADGDLWRARNLNRDSLELAQRVGNPLFEALAHYDRARVLQARGEILRA 524
               + L     A   L RAR     ++    R+ +   E +      R+ +AR      
Sbjct: 500 ---AAMLGLFPEARQLLDRARRSQGQAVSAFHRMYSETIEGMIDLHEGRLREARARF--- 553

Query: 525 LDEVHQGLQRLHKLSPQRLYAVRARLIMYEGFLLTLRMQPQAGLAR----LQAGLTEAR- 579
               H  LQ     S Q      A+   + G L    +     L +    LQ  L  AR 
Sbjct: 554 ----HLALQ-----SSQGSSLDTAQGNAWAGLLYAASVYEADDLRQAKRLLQVYLPLARD 604

Query: 580 ACRDISVLIGHCVIARIEGYSGEFARAFAELAEAERLMHIWDVPPIYYLAMITLVKCELW 639
                 V++GH +++RI    GE   AF  L+E E L H   +P +   A   L +  + 
Sbjct: 605 VWLSDHVVLGHRLLSRIAFAEGEIDHAFQGLSELEYLGHERQLPRL--AAAARLERARML 662

Query: 640 LAQGRTDLAEAWLARLGQ----TYTGERAAAPPEFHPQLPLHVELQQAVLESIRGQPILA 695
           L QG  D A   L   G        G R     E+        E+ Q   E++ G P  A
Sbjct: 663 LMQGHHDAAAQELRTAGTPEIWRVVGARRHLGHEWEDP-----EIGQLRWEAVAGDPRKA 717

Query: 696 QGRLDALLEHGQQSGRQMLSVMALNQKVALLLSIGREAEARRTLAQAFE-AASGGVL--- 751
              L+A     Q+ GR   +          L   G E +A+  L Q  + A + G++   
Sbjct: 718 AVALEASAALAQRGGRVRRTNQLQLLNAVALARAGDEEQAQEVLMQVLQPACTEGLMRLV 777

Query: 752 ----QPFEWLFGEHREWLREQLLQAPPSTLREHLLERLPSTVAQPADPAAPV------ET 801
               +P   L    +  L    L    +   + L        ++   P  PV      E 
Sbjct: 778 LDEGEPVARLVARAQATLDAGQLGPLFADYLQRLRIAFGPLASEEPLPTVPVQLPPMMEA 837

Query: 802 LSSRERAVLQLIAQGCSNQEISEQLFISLHTVKTHASHINSKLGVERRTQAVARAKALGL 861
           L+ +E  +LQL+A+G SN+ ++E+LF+S  TV+TH  +IN KLG   RTQAVA A+ LGL
Sbjct: 838 LTPKEIRLLQLLAEGYSNRALTEKLFVSDSTVRTHLRNINGKLGANNRTQAVAMARRLGL 897

Query: 862 L 862
           +
Sbjct: 898 I 898