Pairwise Alignments

Query, 863 a.a., Transcriptional regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

Subject, 901 a.a., HTH-type transcriptional regulator MalT from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  209 bits (531), Expect = 8e-58
 Identities = 230/902 (25%), Positives = 377/902 (41%), Gaps = 85/902 (9%)

Query: 1   LLLVSAPAGFGKSSLAVEFCQSLPAHWQSLWLGLSARDNDPGRFLERLLEGLQAFFPQLG 60
           L L+++PAG+GK++L  ++           W  L   DN   RF   L+  +Q       
Sbjct: 34  LALITSPAGYGKTTLISQWAAGKN---DIGWYSLDEGDNQQERFASYLIAAVQQ---ATN 87

Query: 61  GRALGLLKMRQRHQPFAFEEWLDGLLDELSTHLSPHEPLLLVLDDYHLAQSPVLDRCLQF 120
           G       M Q+ Q  +       L  EL+     H PL LV+DDYHL  +PV+   ++F
Sbjct: 88  GHCAICETMAQKRQYASLTSLFAQLFIELAEW---HSPLYLVIDDYHLITNPVIHESMRF 144

Query: 121 FLNHLPDGLLVLVTSRQRPDWHLARLRLSRQLLELNEQDLRLTHEEALTLLQ-HHSSSLR 179
           F+ H P+ L ++V SR  P   +A LR+  QLLE+  Q L  TH+EA        SS + 
Sbjct: 145 FIRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIE 204

Query: 180 GEALENLIQRSEGWVAGLRFWLLAASE-AGTEGLLPQALHG-GEGLIRDYLLEEVIDCLP 237
                 +     GW   L+   L+A +   +     + L G     + DYL++EV+D + 
Sbjct: 205 AAESSRICDDVSGWATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVD 264

Query: 238 AEVQAFLYDTAPQERFCSELCDAVREAHDSAEILRYLAAHQVFLVPLDEHGHWYRYHHLF 297
              + FL  +A        L   V    +    L  +    +FL  +D+ G W+ YH LF
Sbjct: 265 LATRHFLLKSAILRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLF 324

Query: 298 SDLLRSRPSAPAMVPAATLHLRACRWFNAQGLIDEAVEQALRAGHLDVAANLVQNLSEEQ 357
            + LR R           +H  A   + AQG   EA+  AL AG   +  +++ N     
Sbjct: 325 GNFLRQRCQWELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLN-HAWS 383

Query: 358 LLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLACQLDAAEELAAHLSRFLPAPS 417
           L     + +L      LP   L+  P+L++L +W +    +      L A     +    
Sbjct: 384 LFNHSELSLLEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEI---K 440

Query: 418 ATAQKSMLAQWLALSGIVARGRGDRETTVRYCSEALESLPQKRYGQRLMCLSTLSNLAIA 477
              + +M A++ AL   VA   G+ +   R    ALE LP   +  R++  S L  +   
Sbjct: 441 DIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHC 500

Query: 478 DGDLWRARNLNRDSLELAQRVGNPLFEALAHYDRARVLQARGEILRALDEVHQGLQRLHK 537
            G+L R+  L + + ++A++     +   +   ++ +L A+G +  A +   +  Q +++
Sbjct: 501 KGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINE 560

Query: 538 LSPQRLYAVRARLIMYEGFLLTLRMQPQAGLARLQAGLTEARACRDI------------S 585
              Q L     +L M+E FL+ +R Q     ARL      AR+  ++             
Sbjct: 561 ---QHL----EQLPMHE-FLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCL 612

Query: 586 VLIGHCVIARIEGYSGEFARAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLAQGRT 645
            ++  C +AR     G+   A ++L   E L+         +++    V+   W   G  
Sbjct: 613 AMLIQCSLAR-----GDLDNARSQLNRLENLLGNGKYHS-DWISNANKVRVIYWQMTGDK 666

Query: 646 DLAEAWLARLGQTYTGERAAAPPEFHPQLPLHVELQQAVLESIRGQPILAQGR-LDALLE 704
             A  WL          R  A PEF      H  LQ       R Q +L +    + +LE
Sbjct: 667 AAAANWL----------RHTAKPEFANN---HF-LQGQWRNIARAQILLGEFEPAEIVLE 712

Query: 705 HGQQSGRQMLSVMALNQKVALLLSI----GREAEARRTLAQAFEAAS-GGVLQPFEWLFG 759
              ++ R +  +  LN+ + LL  +    GR+++A+R L  A + A+  G +  F  + G
Sbjct: 713 ELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFV-IEG 771

Query: 760 EHREWLREQLLQAPP-STLREHLLERLPSTVAQP-----------------ADPAAP--- 798
           E       QL+Q      L +H  +R+   + Q                    P  P   
Sbjct: 772 EAMAQQLRQLIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELI 831

Query: 799 -VETLSSRERAVLQLIAQGCSNQEISEQLFISLHTVKTHASHINSKLGVERRTQAVARAK 857
               L+ RE  VL LI  G SN++I+ +L ++  T+KTH  ++  KLGV  R  AV  A+
Sbjct: 832 RTSPLTQREWQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQDAVQHAQ 891

Query: 858 AL 859
            L
Sbjct: 892 QL 893