Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 612 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 from Variovorax sp. SCN45

 Score = 72.8 bits (177), Expect = 4e-17
 Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 14/177 (7%)

Query: 132 CGLFLAYGLFGEYLPGDLAHRGYGLDQIINQLSFGTEGLYGTPTYVSATYIFLFILFGAF 191
           CGLF  +GL G  L       G     ++  L     G+    T ++  +   F L G  
Sbjct: 33  CGLF--FGLVGIEL-------GVFQSSVMAWLPQRLIGIMANDTLLAVPF---FTLMGLI 80

Query: 192 LEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVTTGQFTIPLMKR 251
           LE++GM +   D    +FG   GG A   +   AL+   TG   A+V++ G  ++P+M R
Sbjct: 81  LERSGMAEDLLDTVGQVFGPMRGGLALAVIFVGALLAATTGVVAASVISMGLISLPIMLR 140

Query: 252 FGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPACLYFG 308
           +GY    + GV A S   +QI+PP +  V  IMA+ +     ++ K A +P  +  G
Sbjct: 141 YGYDRRLSSGVIAASGTLAQIIPPSL--VLIIMADQLGKSVGDMYKGAFLPGFMLMG 195