Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 464 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 33/256 (12%)

Query: 185 FILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVTTGQF 244
           F + GA LE+  + +   +    LFG   GG A   V+  A++G ITG+  A+VV  G  
Sbjct: 73  FTMMGAVLERCRLAEDLLEGVGKLFGAVPGGVAFAVVLVGAVLGAITGTVAASVVAMGVI 132

Query: 245 TIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPAC 304
           ++P+M R+GY    A GV A S   +Q++PP +  V  ++A+ +     ++   A+ P+ 
Sbjct: 133 SLPVMMRYGYNMRLATGVIAASGTITQLIPPSL--VLIVLADQLGRSVGDMYLGAIGPSI 190

Query: 305 LYFG---------SVFWMVHLEAKRSDLKGLPKDQCPSAWGAVKDSWFLLIPLGVLVYL- 354
           L  G         ++F   H+    ++++  PK      W  V      ++P   L++L 
Sbjct: 191 LQVGVFLLFIAVVAIFRPHHMPPLPAEVRSGPK------WKLVGQVLMGMLPAAGLMFLV 244

Query: 355 ----LFSGRTPLFSGMVGLALTAIVILGSAIILKVSNYALRCAFWIALGLLCVGFFRLGI 410
               L    TP  SG +G        +G+ ++  ++        W A    C    R+  
Sbjct: 245 LGTILAGWATPTESGAMG-------AVGAMLLAALNRRLTLDTLWSA----CKSTMRITT 293

Query: 411 GVVFAVIGVLVVACWF 426
            V+F ++G  +    F
Sbjct: 294 MVIFILMGSTIFTLVF 309