Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 687 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

 Score =  791 bits (2043), Expect = 0.0
 Identities = 395/653 (60%), Positives = 501/653 (76%), Gaps = 3/653 (0%)

Query: 19  LFYVALLFSIFQIVTAAFSPVSSIVLRAVHVGFLLWVVFLSYPAHGRQRPWQPLAWVLSL 78
           +F++A+ FS+FQIVTAA+SP+SS+ +R++HVGFLL +VF  Y A GR  P + +A   +L
Sbjct: 30  IFWIAIAFSVFQIVTAAYSPLSSLPVRSIHVGFLLLMVFALYAAMGRGNPVK-VATAWAL 88

Query: 79  GGVA--TALYQWVFESDLIQRSGDLTTTDMIMGIVLVVLVFEAARRVMGIALPIICGLFL 136
           GG++   +LY  ++E +L+QRSGD +TTD+++G V+V LVFEAARR+MG ALP +C +F+
Sbjct: 89  GGLSFILSLYHLIYEGELVQRSGDPSTTDLVVGTVMVALVFEAARRLMGWALPALCLVFV 148

Query: 137 AYGLFGEYLPGDLAHRGYGLDQIINQLSFGTEGLYGTPTYVSATYIFLFILFGAFLEKAG 196
           AY  FGE LP  L HRGYG DQIINQ   GTEG++G P YVSATYIFLFILFG+FLE+AG
Sbjct: 149 AYAAFGEILPAPLGHRGYGFDQIINQYFLGTEGIFGIPCYVSATYIFLFILFGSFLEQAG 208

Query: 197 MIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVTTGQFTIPLMKRFGYKA 256
           MI+LFTD A+G  GH  GGPAKVAVV+S LMGTI GSGIANVVTTG  TIPLMKRFGY++
Sbjct: 209 MIRLFTDVALGTVGHTKGGPAKVAVVTSGLMGTINGSGIANVVTTGALTIPLMKRFGYRS 268

Query: 257 AFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPACLYFGSVFWMVHL 316
            FAG VEAT+SMG QIMPPVMGAVAFIMAET+N+ + E+ KAA IPA LY+ S  WMVHL
Sbjct: 269 EFAGAVEATASMGGQIMPPVMGAVAFIMAETLNISYAEVCKAAAIPALLYYASAIWMVHL 328

Query: 317 EAKRSDLKGLPKDQCPSAWGAVKDSWFLLIPLGVLVYLLFSGRTPLFSGMVGLALTAIVI 376
           EA  + L G+PKDQCPSA GA++  W+L++PL  LVYLL +G TP+FSG VGLALTAIVI
Sbjct: 329 EAGIAGLHGMPKDQCPSAQGALRRQWYLMVPLAALVYLLLAGFTPMFSGTVGLALTAIVI 388

Query: 377 LGSAIILKVSNYALRCAFWIALGLLCVGFFRLGIGVVFAVIGVLVVACWFMQGTRETLVI 436
           LGS+I   +   A R  FW  LG+    FF+LGI VV   + VLV   +F++G RET+ +
Sbjct: 389 LGSSIAANIGGMAGRVVFWGVLGIASSAFFKLGINVVVVTVAVLVGVNFFVRGGRETMRM 448

Query: 437 CLHALVDGARHAVPVGIACALVGSIIAVVSLTGVASTFAGYILAIGRDNLLLSLILTMLT 496
            +  LV+GAR AVPVG+AC LVG+II  ++LTG+A +F   ++++   +L L+LILTM+ 
Sbjct: 449 TVRGLVEGARSAVPVGVACTLVGTIIGTMTLTGIAGSFTQGLVSMSGGSLFLTLILTMIA 508

Query: 497 CLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGILADLTPPVALACFAAA 556
            L+LGMGIPTIP YIITSS+ AP L ++GVPL+VSHM+VFYFGILADLTPPV LA FAAA
Sbjct: 509 SLILGMGIPTIPTYIITSSLVAPMLFKMGVPLVVSHMYVFYFGILADLTPPVGLAAFAAA 568

Query: 557 PIARESGLKISFWAVRIALAGFVIPFMTVYNPALMLQGDNLWMTAYMLIKTLLAVGLWGM 616
            IAR +     +WAVR+A+AGFV+PFM VY+P+LM+   +L+ TAY++IK LLA+GLWG 
Sbjct: 569 SIARSNFFVTGWWAVRVAMAGFVVPFMAVYDPSLMMVSGSLFDTAYVVIKALLAIGLWGA 628

Query: 617 ASTGYLQQKMPIWERLLCFAAGALLVVALPVTDEIGFVLGGLLILQHVWRARR 669
           A+ GYL   M +WER +   A  LLV A+P+TDEIGF L  + +  H  RARR
Sbjct: 629 ATIGYLWAPMKMWERAVAVLAAFLLVAAVPLTDEIGFALSAVFLAWHWMRARR 681