Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 442 a.a., TRAP transporter large permease from Magnetospirillum magneticum AMB-1

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 67/229 (29%), Positives = 92/229 (40%), Gaps = 16/229 (6%)

Query: 160 INQLSFGTEGL-YGTPTYVSATYIFLFILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAK 218
           +N L F    L Y   +      I LFIL G F    G+ K     A  L GH  GG A 
Sbjct: 44  LNSLLFTLNNLVYARLSNYDLAVIPLFILMGQFATHGGLSKALFHAAGTLIGHFKGGLAY 103

Query: 219 VAVVSSALMGTITGSGIANVVTTGQFTIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMG 278
            A  + A  G I GS +A   T GQ  +P + R  Y    A G  A       ++PP + 
Sbjct: 104 AATAACAAFGAICGSSLATAATMGQVALPELTRRNYSGRLATGTLAAGGTLGILIPPSVP 163

Query: 279 AV--AFIMAETINVPFVEIAKAALIPACLYFGSVFWMVHLEAK------RSDLKGLPKDQ 330
            V  A +  E+I   FV      +I A  Y   +  +V L+ K      R  LK + K Q
Sbjct: 164 LVVYAVLTQESIGKLFVAAVIPGIIAALGYMAVIRIIVSLDPKAGPASERVSLKEMIKAQ 223

Query: 331 CPSAWGAVKDSWFLLIPLGVLVYLLFSGRTPLFSGMVGLALTAIVILGS 379
                G +     LL+ L V+V +      P  +  +G A   I+ + S
Sbjct: 224 L----GIIP---VLLVFLVVIVGIYGGWANPTEAASIGAAACGIIAVVS 265