Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 490 a.a., permease component of C4 dicarboxylate transporter from Agrobacterium fabrum C58

 Score = 71.2 bits (173), Expect = 1e-16
 Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 16/210 (7%)

Query: 170 LYGTPTYVSATYIFLFILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGT 229
           ++G  +  +   I  F   G  LEK+GM +   D    LFG   GG A   +   A++  
Sbjct: 48  IFGQMSNETLLAIPFFTFMGLILEKSGMAEDLLDTIGQLFGPVRGGIAFAVIFVGAILAA 107

Query: 230 ITGSGIANVVTTGQFTIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETIN 289
            TG   A+V++ G  ++P+M R+GY    A G  A S   +QI+PP +  V  ++A+ + 
Sbjct: 108 TTGVVAASVISMGLISLPIMLRYGYDRKIAAGTIAASGTLAQIIPPSL--VLIVLADQLG 165

Query: 290 VPFVEIAKAALIPACLYFGSVFWMVHLEAKRSDLKGLPKDQCPSAWGAVKDSWFL----- 344
               ++ K ALIP  +  G+    + + +  S  K       PS    ++ S  L     
Sbjct: 166 RSVGDMYKGALIPGLMLVGAYTLYIVVTSIISPAK---VPALPSEARTLRGSKLLLKVIT 222

Query: 345 -LIPLGVLVYL----LFSG-RTPLFSGMVG 368
            L+P  VL++L    +F G  TP   G +G
Sbjct: 223 SLVPPLVLIFLVLGTIFLGIATPTEGGAMG 252