Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 489 a.a., TRAP dicarboxylate transporter subunit DctM from Agrobacterium fabrum C58

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 18/197 (9%)

Query: 185 FILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVTTGQF 244
           F   GA LE+ G+ +   +    LFG   GG A   ++  A++G ITG+  A+V+T G  
Sbjct: 73  FTFMGAILERCGLAEDLLEGTGKLFGAIPGGLAYAVIIVGAILGAITGTVAASVITMGVI 132

Query: 245 TIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPAC 304
           ++P+M ++GY    A GV A S   +Q++PP +  V  ++A+ +     ++   A+ P+ 
Sbjct: 133 SLPIMLKYGYNPRLATGVIAASGTITQVIPPSL--VLIVLADQLGKSVGDMYLGAIGPSI 190

Query: 305 LY--FGSVFWMVHLEAKRSDLKGLPKDQCPSAWGAVKDSWFL-----LIPLGVLVYL--- 354
           L      +F ++    +  DL  LP    P A G +  +        +IP  VL++L   
Sbjct: 191 LQVTIFMLFILLMSIVRPKDLPALP----PEARGELNRALVFRVLAGMIPSIVLIFLVLG 246

Query: 355 -LFSG-RTPLFSGMVGL 369
            +F G  TP  +G +G+
Sbjct: 247 TIFLGLATPTEAGALGV 263