Pairwise Alignments

Query, 255 a.a., putative membrane protein from Pseudomonas fluorescens FW300-N2E2

Subject, 251 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  375 bits (963), Expect = e-109
 Identities = 192/250 (76%), Positives = 216/250 (86%), Gaps = 1/250 (0%)

Query: 7   LGQWAFAPTQWLVIGSAIALAYIVFGIAGFGTALVAAPILLLFMPLSKIVPLLVLLDFVA 66
           L Q +F+   WL I  AIA AYIVFGIAGFGTALVA P+L+ FMPLS+I+PLLVLLDFVA
Sbjct: 2   LAQLSFSGLDWLPILFAIAAAYIVFGIAGFGTALVAGPVLIHFMPLSRIIPLLVLLDFVA 61

Query: 67  AFGNLLPSRRDVSRPELLRLLPCMALGCTLGVIFLLNLKSDLLLLLMGVFISCYAIYSLL 126
           AFGNLLPSRRDV R ELLRLLP MALGCTLGV+FLL LKSDLLLLLMGVF++ YA+Y L 
Sbjct: 62  AFGNLLPSRRDVVRSELLRLLPFMALGCTLGVVFLLQLKSDLLLLLMGVFVTAYALYGLA 121

Query: 127 IKTRPTQLSALWAVPMGTVGGMFGALFGSGGFLYAIYLNSRLP-KDPARATQSALISCST 185
           +K RP  LS  WAVPMGT GG+FGALFGSGGFLYA+YL++RL  K+  RATQSALISCST
Sbjct: 122 VKVRPASLSGFWAVPMGTAGGLFGALFGSGGFLYALYLSARLEVKEQVRATQSALISCST 181

Query: 186 VVRLSLFIVAGVYAELPLLVLALCLLPAMALGLWVGRRLTMKMSREAFVRLVTWLVLASG 245
           +VRLSLF++AGVYA+  LL+LA CLLP M +GLWVGRRLT ++SREAFVRLVTWLVLASG
Sbjct: 182 IVRLSLFLIAGVYADQRLLLLAACLLPVMFIGLWVGRRLTNRLSREAFVRLVTWLVLASG 241

Query: 246 LALIGRYLSA 255
           LALIGRYLSA
Sbjct: 242 LALIGRYLSA 251