Pairwise Alignments

Query, 260 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 297 a.a., spermidine/putrescine ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  137 bits (345), Expect = 3e-37
 Identities = 84/253 (33%), Positives = 138/253 (54%), Gaps = 11/253 (4%)

Query: 8   GLVFLHFPILIIFLYAFNTEDAAFSFPPKGLTLKWFSVAFSRPDVLEAIKLSLQVAAIAT 67
           GL+F++ P+LI+ +Y+FN       +   G ++KW+        ++ ++  SL++A    
Sbjct: 14  GLLFIYLPMLILVIYSFNASKLVTVWG--GWSIKWYVGLLDNSQLMGSVMRSLEIACYTA 71

Query: 68  LIAMVLGTLASAALYR-RDFFGKQGISLMLILPIALPGIITGIALLATFKTLGI------ 120
           + A+ LGTLA+  L R   F G+     ++  P+ +P +ITG++LL  F  +        
Sbjct: 72  VAAVALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLLFVAMAQMIGWPQ 131

Query: 121 EPGMFTIVVGHATFCVVIVYNNVIARLRRTSHSLIEASMDLGADGWQTFRYIILPNLGSA 180
           E G+ TI + H TFC   V   V ARLR    S+ EA+MDLGA  W+ F  I +P +  +
Sbjct: 132 ERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGAKPWKVFFLITIPMIAPS 191

Query: 181 LLAGGMLAFALSFDEIIVTTFTAG-HERTLPLWLLNQLSRPRDVPVTNVVAMLVMIVTML 239
           L AGGM++FALS D++++ +F +G    TLP+ + + + R    P  N VA L+++   L
Sbjct: 192 LAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAV-RLGVKPEINAVASLILLSVSL 250

Query: 240 PILGAYYLTRGGE 252
                +Y +R  E
Sbjct: 251 VTFFVWYFSRQAE 263