Pairwise Alignments

Query, 859 a.a., DNA mismatch repair protein MutS from Pseudomonas fluorescens FW300-N2E2

Subject, 851 a.a., DNA mismatch repair protein MutS from Serratia liquefaciens MT49

 Score =  967 bits (2501), Expect = 0.0
 Identities = 496/857 (57%), Positives = 627/857 (73%), Gaps = 9/857 (1%)

Query: 4   AVNDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSA 63
           + + L SHTPMMQQY RLK QHP+ L+FYRMGDFYE+FY+DAK+A++LLDI+LT RG SA
Sbjct: 3   STDKLDSHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASA 62

Query: 64  GMAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTVSDE 123
           G  IPM G+P+HA E YLAKLV+LGESV +CEQ+GDPATSKGPVER+VVRI+TPGT++DE
Sbjct: 63  GEPIPMAGVPHHAVENYLAKLVQLGESVALCEQIGDPATSKGPVERKVVRIVTPGTITDE 122

Query: 124 ALLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERVNPVELLIPD 183
           ALL ER+DNL+AA+  D R FG A LDI+SG F V E    E + AEL+R NP ELL P+
Sbjct: 123 ALLQERQDNLLAAIWQDARGFGYATLDISSGRFRVAEPADIETMAAELQRTNPAELLYPE 182

Query: 184 DWPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCENLTLAIGAAGCLLA 243
            + +    E+R G+RRR  W+FE ++A + L  QF T+DL GFG E    A+ AAGCLL 
Sbjct: 183 TFEQMSLIEQRHGLRRRPLWEFEPETARQQLNLQFGTRDLTGFGVEQAHQALRAAGCLLQ 242

Query: 244 YAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQTAM 303
           Y K+TQRT+LPH+R +  ER  D +++D A+RRNLEL  +L+GG +NTL +++D   TAM
Sbjct: 243 YVKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQSLSGGTENTLAAILDHSVTAM 302

Query: 304 GSRLLTRWLNRPLRDLTVLLARQSSITCLLDRYRFEQLQPQLKEIGDIERILARIGLRNA 363
           GSR+L RWL+ P RD+ VL  RQ +I  L D Y   +LQP L+++GD+ERILAR+ LR+A
Sbjct: 303 GSRMLKRWLHMPTRDIKVLNDRQQAIGALQDLYA--ELQPSLRQVGDLERILARLALRSA 360

Query: 364 RPRDLARLRDALGALPELQVAMTGLEAPHLQQLARTTSTYPELAALLEKAIIDNPPAVIR 423
           RPRDLAR+R A   LP++   + G+  PH+Q L      + EL  LLE+A+++ PP ++R
Sbjct: 361 RPRDLARMRHAFQQLPDIHALLKGVNTPHVQHLLSQVGQFDELQDLLERAVVEAPPVLVR 420

Query: 424 DGGVLKTGYDAELDELQALSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIELPSK 483
           DGGV+  GY++ELDE +AL++ A  +L  LE RE+ + GL  LKVG+N +HGY+I++   
Sbjct: 421 DGGVIAPGYNSELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRG 480

Query: 484 QAEQAPADYVRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLEDLISQLP 543
           Q+   P  YVRRQTLK AER+I PELK +EDK L++K +ALA EK LYE L + L+  L 
Sbjct: 481 QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALAIEKGLYEELFDLLLPHLG 540

Query: 544 PLQDTAGALAELDVLSNLAERALNLDLNCPRFVSEPCMRISQGRHPVVEQVLTTPFVAND 603
            LQ +A ALAELDVL+NLAERA  L+  CP    +P +RI++GRHPVVEQVL+ PF++N 
Sbjct: 541 ELQQSAAALAELDVLANLAERAETLNYACPTMSEQPGVRITEGRHPVVEQVLSEPFISNP 600

Query: 604 LSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSS 663
           LSL    RML+ITGPNMGGKSTYMRQTALIVL+AHIGS+VPA+   +  VDRIFTR+G++
Sbjct: 601 LSLSPQRRMLIITGPNMGGKSTYMRQTALIVLMAHIGSYVPASKAVIGPVDRIFTRVGAA 660

Query: 664 DDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLA-HLR 722
           DDLA GRSTFMVEM+ETANILHNATE SLVLMDE+GRGTST+DGLSLAWA AE LA  ++
Sbjct: 661 DDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAENLASRIK 720

Query: 723 AYTLFATHYFELTVLPESQPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAG 782
           A TLFATHYFELT LPE    V NVHL+A EH + I F+H V  G AS+SYGLAVA LAG
Sbjct: 721 AMTLFATHYFELTTLPEKMEGVVNVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAG 780

Query: 783 VPSEVITRAREHLSRLETTSLPHEAPRPTKGKPTAPQQSDLFASLPHPVLDELAKLDLDD 842
           VP EVI RAR+ L  LE  S        T        Q  L      P ++ L  LD D 
Sbjct: 781 VPREVIKRARQKLRELEAIS------NHTASGTVDATQMTLLNEETSPAVEALEALDPDS 834

Query: 843 LTPRRALDLLYTLKTRI 859
           L+PR+AL+ +Y LK  +
Sbjct: 835 LSPRQALEWIYRLKNMV 851