Pairwise Alignments

Query, 859 a.a., DNA mismatch repair protein MutS from Pseudomonas fluorescens FW300-N2E2

Subject, 853 a.a., DNA mismatch repair protein MutS from Erwinia tracheiphila SCR3

 Score =  962 bits (2488), Expect = 0.0
 Identities = 502/860 (58%), Positives = 631/860 (73%), Gaps = 10/860 (1%)

Query: 1   MNTAVNDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG 60
           +N  VN L SHTPM+QQY RLK++HP+ L+FYRMGDFYE+FY+DAK+A++LLDI+LT RG
Sbjct: 3   LNDNVN-LDSHTPMIQQYLRLKSEHPEILLFYRMGDFYELFYDDAKRASQLLDISLTRRG 61

Query: 61  QSAGMAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTV 120
            SAG  IPM G+PYHA E YLAKLV+LGESV ICEQ+GDPA SKGPVER+VVRI+TPGT+
Sbjct: 62  ASAGQPIPMAGVPYHAVENYLAKLVQLGESVAICEQIGDPALSKGPVERKVVRIVTPGTI 121

Query: 121 SDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERVNPVELL 180
           SDEALL ER+DN++AA+  D R FG A LDI+SG F + E    E +  EL+R NP ELL
Sbjct: 122 SDEALLQERQDNILAAIWQDARGFGYATLDISSGRFRLAEPSDAETMATELQRTNPAELL 181

Query: 181 IPDDWPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCENLTLAIGAAGC 240
            P++       E RRG+RRR  W+FE D+A + L  QF T+DL GFG E   LA+ AAGC
Sbjct: 182 YPEELAAMALIENRRGLRRRPLWEFEIDTARQQLNLQFGTRDLIGFGIEQAHLALRAAGC 241

Query: 241 LLAYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQ 300
           LL Y K+TQRT+LPH+RS+  ER  D++++D A+RRNLE+  NL+GG +NTL +V+D+  
Sbjct: 242 LLQYVKDTQRTSLPHIRSVTMERQQDSIIMDAATRRNLEITQNLSGGIENTLAAVLDKTA 301

Query: 301 TAMGSRLLTRWLNRPLRDLTVLLARQSSITCLLDRYRFEQLQPQLKEIGDIERILARIGL 360
           T MGSR+L RWL+ P+RD+  L+ RQ SI  L D    ++L P L++IGD+ERILAR+ L
Sbjct: 302 TPMGSRMLKRWLHTPVRDIPTLVNRQQSIGSLQDIN--DELSPLLRQIGDLERILARLAL 359

Query: 361 RNARPRDLARLRDALGALPELQVAMTGLEAPHLQQLARTTSTYPELAALLEKAIIDNPPA 420
           R ARPRDLAR+R A   LP+L   +  +  PHLQ+L +    + EL  LLE AII++PP 
Sbjct: 360 RTARPRDLARMRHAFQQLPQLDAILINIATPHLQRLRQQIGQFTELRQLLENAIIESPPI 419

Query: 421 VIRDGGVLKTGYDAELDELQALSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIEL 480
           +IRDGGV+  GY+AELDE +AL++ A  +L  LE RE+ + GL  LKVG+N IHGY+I++
Sbjct: 420 LIRDGGVIAPGYNAELDEWRALADGATDYLDRLEIREREKLGLDTLKVGFNAIHGYYIQV 479

Query: 481 PSKQAEQAPADYVRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLEDLIS 540
              Q+   P  YVRRQTLK AER+I PELK +EDK L++K +AL+ EK LYE L + L+ 
Sbjct: 480 SRGQSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALSLEKSLYEELFDLLLP 539

Query: 541 QLPPLQDTAGALAELDVLSNLAERALNLDLNCPRFVSEPCMRISQGRHPVVEQVLTTPFV 600
            L  LQ +A +LAELDVLSNLAERA  L+ +CP    +P ++I+ GRHPVVEQVL  PF+
Sbjct: 540 HLEALQLSAASLAELDVLSNLAERAWTLNYSCPLLSEKPGIKITGGRHPVVEQVLKEPFI 599

Query: 601 ANDLSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRI 660
           AN LSL    RMLVITGPNMGGKSTYMRQ ALI L+A IGS+VPA   E+  VDRIFTR+
Sbjct: 600 ANPLSLSVQRRMLVITGPNMGGKSTYMRQAALITLMASIGSYVPADEAEIGPVDRIFTRV 659

Query: 661 GSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAH 720
           G++DDLA GRSTFMVEM+ETANILHNATE SLVLMDE+GRGTST+DGLSLAWA AE LA+
Sbjct: 660 GAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLAN 719

Query: 721 L-RAYTLFATHYFELTVLPESQPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQ 779
             +A TLFATHYFELT LPE    V N+HL+A EH + I F+H V  G AS+SYGL+VA 
Sbjct: 720 RNKAMTLFATHYFELTTLPEKMEGVVNIHLDAVEHGDTIAFIHSVREGAASKSYGLSVAA 779

Query: 780 LAGVPSEVITRAREHLSRLETTSLPHEAPRPTKGKPTAPQQSDLFASLPHPVLDELAKLD 839
           LAGVP EVI RA++ L  LET S+ + A     G      Q  L      P ++ L  LD
Sbjct: 780 LAGVPKEVIKRAKQKLRELETLSI-NSATSKIDG-----SQLPLLVEETSPAVEALEALD 833

Query: 840 LDDLTPRRALDLLYTLKTRI 859
            D L+PR+AL+ +Y LK+ +
Sbjct: 834 PDSLSPRQALEWIYRLKSLV 853