Pairwise Alignments

Query, 859 a.a., DNA mismatch repair protein MutS from Pseudomonas fluorescens FW300-N2E2

Subject, 853 a.a., DNA mismatch repair protein MutS from Escherichia coli ECOR27

 Score =  978 bits (2527), Expect = 0.0
 Identities = 507/862 (58%), Positives = 638/862 (74%), Gaps = 15/862 (1%)

Query: 3   TAVNDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQS 62
           +A+ +  +HTPMMQQY +LK QHP+ L+FYRMGDFYE+FY+DAK+A++LLDI+LT RG S
Sbjct: 2   SAIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGAS 61

Query: 63  AGMAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTVSD 122
           AG  IPM GIPYHA E YLAKLV  GESV ICEQ+GDPATSKGPVER+VVRI+TPGT+SD
Sbjct: 62  AGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISD 121

Query: 123 EALLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERVNPVELLIP 182
           EALL ER+DNL+AA+  D + FG A LDI+SG F + E    E + AEL+R NP ELL  
Sbjct: 122 EALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYA 181

Query: 183 DDWPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCENLTLAIGAAGCLL 242
           +D+ +    E RRG+RRR  W+FE D+A + L  QF T+DL GFG EN    + AAGCLL
Sbjct: 182 EDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLL 241

Query: 243 AYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQTA 302
            YAK+TQRT LPH+RS+  ER  D++++D A+RRNLE+  NLAGG +NTL SV+D   T 
Sbjct: 242 QYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVTP 301

Query: 303 MGSRLLTRWLNRPLRDLTVLLARQSSITCLLDRYRFEQLQPQLKEIGDIERILARIGLRN 362
           MGSR+L RWL+ P+RD  VLL RQ +I  L D     +LQP L+++GD+ERILAR+ LR 
Sbjct: 302 MGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTA--ELQPVLRQVGDLERILARLALRT 359

Query: 363 ARPRDLARLRDALGALPELQVAMTGLEAPHLQQLARTTSTYPELAALLEKAIIDNPPAVI 422
           ARPRDLAR+R A   LPEL+  +  +++  +Q L      + EL  LLE+AIID PP ++
Sbjct: 360 ARPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLV 419

Query: 423 RDGGVLKTGYDAELDELQALSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIELPS 482
           RDGGV+ +GY+ ELDE +AL++ A  +L  LE RE+ RTGL  LKVG+N +HGY+I++  
Sbjct: 420 RDGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISR 479

Query: 483 KQAEQAPADYVRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLEDLISQL 542
            Q+  AP +Y+RRQTLK AER+I PELK +EDK L++K +ALA EK LYE L + L+  L
Sbjct: 480 GQSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHL 539

Query: 543 PPLQDTAGALAELDVLSNLAERALNLDLNCPRFVSEPCMRISQGRHPVVEQVLTTPFVAN 602
             LQ +A ALAELDVL NLAERA  L+  CP F+ +P +RI++GRHPVVEQVL  PF+AN
Sbjct: 540 EALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIAN 599

Query: 603 DLSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGS 662
            L+L    RML+ITGPNMGGKSTYMRQTALI L+A+IGS+VPA   E+  +DRIFTR+G+
Sbjct: 600 PLNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGA 659

Query: 663 SDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAH-L 721
           +DDLA GRSTFMVEM+ETANILHNATE SLVLMDE+GRGTST+DGLSLAWA AE LA+ +
Sbjct: 660 ADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKI 719

Query: 722 RAYTLFATHYFELTVLPESQPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLA 781
           +A TLFATHYFELT LPE    VANVHL+A EH + I F+H V  G AS+SYGLAVA LA
Sbjct: 720 KALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALA 779

Query: 782 GVPSEVITRAREHLSRLETTSLPHEAPRPTKGKP----TAPQQSDLFASLPHPVLDELAK 837
           GVP EVI RAR+ L  LE+ S P+ A     G      + P+++        P ++ L  
Sbjct: 780 GVPKEVIKRARQKLRELESIS-PNAAATQVDGTQMSLLSVPEETS-------PAVEALEN 831

Query: 838 LDLDDLTPRRALDLLYTLKTRI 859
           LD D LTPR+AL+ +Y LK+ +
Sbjct: 832 LDPDSLTPRQALEWIYRLKSLV 853